Difference between revisions of "TSS:Hg 102882.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MED3= | |MED3= | ||
|TRAP37= | |TRAP37= | ||
| − | |all_trans=ENST00000357028.6:0 ENST00000474263.1:0 | + | |all_trans=ENST00000357028.6:0 ENST00000292035.10:0 ENST00000650776.1:0 ENST00000474263.1:0 NM_004269:0 NM_001253881:0 NM_001253882:0 BC002878:0 GQ900957:0 AK316345:0 AK298436:0 BC119722:0 BC119723:0 HG518166:0 ENST00000651950.1:1 ENST00000651555.1:4 BC070331:4 BC064608:5 EU446747:15 AB527898:15 AF104252:130 AF230382:130 DQ099387:130 Z36848:190 ENST00000444872.3:215 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=132079874 | |end=132079874 | ||
|end_of_center_position=132079867 | |end_of_center_position=132079867 | ||
|entrez_id=9442 | |entrez_id=9442 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=CRAP34 | + | |gene_alias=CRAP34{{!}}CRSP34{{!}}CRSP8{{!}}MED3{{!}}TRAP37 |
|gene_description=mediator complex subunit 27 | |gene_description=mediator complex subunit 27 | ||
|gene_id=9442 | |gene_id=9442 | ||
| Line 31: | Line 31: | ||
|start_of_center_position=132079866 | |start_of_center_position=132079866 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000357028.6 ENST00000474263.1 | + | |transcript_name=ENST00000357028.6 ENST00000292035.10 ENST00000650776.1 ENST00000474263.1 NM_004269 NM_001253881 NM_001253882 BC002878 GQ900957 AK316345 AK298436 BC119722 BC119723 HG518166 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102882.1 | |tss_id=hg_102882.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q6P2C8 U4Q365 | + | |uniprot_id=A0A024R8B7 A0A384N6D1 Q6P2C8 U4Q365 |
}} | }} | ||
Revision as of 17:14, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 132079866 |
|---|---|
| End of the center position in the TSS region: | 132079867 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000357028.6 ENST00000292035.10 ENST00000650776.1 ENST00000474263.1 NM_004269 NM_001253881 NM_001253882 BC002878 GQ900957 AK316345 AK298436 BC119722 BC119723 HG518166 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENST00000357028.6:0 ENST00000292035.10:0 ENST00000650776.1:0 ENST00000474263.1:0 NM_004269:0 NM_001253881:0 NM_001253882:0 BC002878:0 GQ900957:0 AK316345:0 AK298436:0 BC119722:0 BC119723:0 HG518166:0 ENST00000651950.1:1 ENST00000651555.1:4 BC070331:4 BC064608:5 EU446747:15 AB527898:15 AF104252:130 AF230382:130 DQ099387:130 Z36848:190 ENST00000444872.3:215 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001253882 |
| Entrez ID: | 9442 |
| Nearest Unigene: | Hs.374262 |
| Nearest Refseq: | NM_004269 |
| Nearest Ensembl: | ENSG00000160563 |
| Gene Name: | mediator complex subunit 27 |
| Gene Alias: | CRAP34|CRSP34|CRSP8|MED3|TRAP37 |
| Gene Description: | mediator complex subunit 27 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
