Difference between revisions of "TSS:Hg 102891.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=85130 |entrez_id=23064 |gc_percent=0.517413 |gene_alias=ALS4|AOA2|SCAR1|bA479K20.2 |gene_description=senataxin |gene_name=SETX |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AOA2= | ||
| + | |SCAR1= | ||
| + | |bA479K20.2= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=85001 | ||
| + | |end=132269859 | ||
| + | |end_of_center_position=132269856 | ||
|entrez_id=23064 | |entrez_id=23064 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=ALS4 | + | |gene_alias=ALS4{{!}}AOA2{{!}}SCAN2{{!}}SCAR1{{!}}Sen1{{!}}bA479K20.2 |
|gene_description=senataxin | |gene_description=senataxin | ||
|gene_name=SETX | |gene_name=SETX | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000107290 | |nearest_ensembl=ENSG00000107290 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351527 |
|nearest_refseq=NM_015046 | |nearest_refseq=NM_015046 | ||
|nearest_unigene=Hs.460317 | |nearest_unigene=Hs.460317 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=132269851 | ||
| + | |start_of_center_position=132269855 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102891.1 | |tss_id=hg_102891.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:14, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 132269855 |
|---|---|
| End of the center position in the TSS region: | 132269856 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 85001 |
|---|---|
| Nearest PromoterID: | NM_001351527 |
| Entrez ID: | 23064 |
| Nearest Unigene: | Hs.460317 |
| Nearest Refseq: | NM_015046 |
| Nearest Ensembl: | ENSG00000107290 |
| Gene Name: | SETX |
| Gene Alias: | ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2 |
| Gene Description: | senataxin |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
