Difference between revisions of "TSS:Hg 102903.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=9834 |entrez_id=64794 |gc_percent=0.353234 |gene_alias=PPP1R25 |gene_description=DEAD-box helicase 31 |gene_name=DDX31 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=NA | ||
|distance_to_tss=9834 | |distance_to_tss=9834 | ||
| + | |end=132653493 | ||
| + | |end_of_center_position=132653493 | ||
|entrez_id=64794 | |entrez_id=64794 | ||
|gc_percent=0.353234 | |gc_percent=0.353234 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_022779 | |nearest_refseq=NM_022779 | ||
|nearest_unigene=Hs.660767 | |nearest_unigene=Hs.660767 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=132653491 | ||
| + | |start_of_center_position=132653492 | ||
| + | |strand=- | ||
| + | |tata_box=-69(CTTTTTATATTG,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102903.1 | |tss_id=hg_102903.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:14, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 132653492 |
|---|---|
| End of the center position in the TSS region: | 132653493 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 9834 |
|---|---|
| Nearest PromoterID: | NM_001322343 |
| Entrez ID: | 64794 |
| Nearest Unigene: | Hs.660767 |
| Nearest Refseq: | NM_022779 |
| Nearest Ensembl: | ENSG00000125485 |
| Gene Name: | DDX31 |
| Gene Alias: | PPP1R25 |
| Gene Description: | DEAD-box helicase 31 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.353234 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -69(CTTTTTATATTG,+,0.00) |
