Difference between revisions of "TSS:Hg 102909.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-88468 |entrez_id=11092 |gc_percent=0.452736 |gene_alias=C9orf9|Mast |gene_description=sperm acrosome associated 9 |gene_name=S...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Mast= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-88492 | ||
| + | |end=132789858 | ||
| + | |end_of_center_position=132789853 | ||
|entrez_id=11092 | |entrez_id=11092 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=C9orf9 | + | |gene_alias=C9orf9{{!}}Mast |
|gene_description=sperm acrosome associated 9 | |gene_description=sperm acrosome associated 9 | ||
|gene_name=SPACA9 | |gene_name=SPACA9 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_018956 | |nearest_refseq=NM_018956 | ||
|nearest_unigene=Hs.62595 | |nearest_unigene=Hs.62595 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=132789846 | ||
| + | |start_of_center_position=132789852 | ||
| + | |strand=- | ||
| + | |tata_box=-35(ACCCTTAAAAGC,-,0.00),-34(CCCTTAAAAGCA,+,0.00),-33(CCTTAAAAGCAG,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102909.1 | |tss_id=hg_102909.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:14, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 132789852 |
|---|---|
| End of the center position in the TSS region: | 132789853 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -88492 |
|---|---|
| Nearest PromoterID: | NM_001316898 |
| Entrez ID: | 11092 |
| Nearest Unigene: | Hs.62595 |
| Nearest Refseq: | NM_018956 |
| Nearest Ensembl: | ENSG00000165698 |
| Gene Name: | SPACA9 |
| Gene Alias: | C9orf9|Mast |
| Gene Description: | sperm acrosome associated 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(ACCCTTAAAAGC,-,0.00),-34(CCCTTAAAAGCA,+,0.00),-33(CCTTAAAAGCAG,+,0.00) |
