Difference between revisions of "TSS:Hg 10291.1"
From referenceTSS
| Line 5: | Line 5: | ||
|RRP6= | |RRP6= | ||
|Rrp6p= | |Rrp6p= | ||
| − | |all_trans=ENST00000304457.11:0 ENST00000460196.1:0 | + | |all_trans=ENST00000304457.11:0 ENST00000376936.9:0 ENST00000460196.1:0 NM_001001998:0 NM_002685:0 BC039901:0 L01457:0 AK296559:0 X66113:0 KJ905274:0 EU832630:0 EU832705:0 AB527852:0 BC008460:0 AK308778:0 AK294058:0 AB209236:2 BC028687:-3 BC073788:-8 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=15 |
|end=11099878 | |end=11099878 | ||
|end_of_center_position=11099855 | |end_of_center_position=11099855 | ||
|entrez_id=5394 | |entrez_id=5394 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=PM-Scl | + | |gene_alias=PM-Scl{{!}}PM/Scl-100{{!}}PMSCL{{!}}PMSCL2{{!}}RRP6{{!}}Rrp6p{{!}}p2{{!}}p3{{!}}p4 |
|gene_description=exosome component 10 | |gene_description=exosome component 10 | ||
|gene_id=5394 | |gene_id=5394 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_002685 | |nearest_refseq=NM_002685 | ||
|nearest_unigene=Hs.632368 | |nearest_unigene=Hs.632368 | ||
| − | |num_trans= | + | |num_trans=19 |
|p2= | |p2= | ||
|p3= | |p3= | ||
| Line 35: | Line 35: | ||
|start_of_center_position=11099854 | |start_of_center_position=11099854 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000304457.11 ENST00000460196.1 | + | |transcript_name=ENST00000304457.11 ENST00000376936.9 ENST00000460196.1 NM_001001998 NM_002685 BC039901 L01457 AK296559 X66113 KJ905274 EU832630 EU832705 AB527852 BC008460 AK308778 AK294058 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10291.1 | |tss_id=hg_10291.1 | ||
Revision as of 17:14, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11099854 |
|---|---|
| End of the center position in the TSS region: | 11099855 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000304457.11 ENST00000376936.9 ENST00000460196.1 NM_001001998 NM_002685 BC039901 L01457 AK296559 X66113 KJ905274 EU832630 EU832705 AB527852 BC008460 AK308778 AK294058 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000304457.11:0 ENST00000376936.9:0 ENST00000460196.1:0 NM_001001998:0 NM_002685:0 BC039901:0 L01457:0 AK296559:0 X66113:0 KJ905274:0 EU832630:0 EU832705:0 AB527852:0 BC008460:0 AK308778:0 AK294058:0 AB209236:2 BC028687:-3 BC073788:-8 |
TATA-Box annotation
| Distance to TSS: | 15 |
|---|---|
| Nearest PromoterID: | NM_001001998 |
| Entrez ID: | 5394 |
| Nearest Unigene: | Hs.632368 |
| Nearest Refseq: | NM_002685 |
| Nearest Ensembl: | ENSG00000171824 |
| Gene Name: | exosome component 10 |
| Gene Alias: | PM-Scl|PM/Scl-100|PMSCL|PMSCL2|RRP6|Rrp6p|p2|p3|p4 |
| Gene Description: | exosome component 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
