Difference between revisions of "TSS:Hg 102913.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Mast= | |Mast= | ||
| − | |all_trans=AK057266:0 AK292186:0 AK093333:0 BC034776:-7 HQ447306:9 KJ895698:9 KJ905630:9 CU689970:9 AK093446:-18 | + | |all_trans=ENST00000298545.4:0 NM_001317959:0 NM_001317958:0 NM_152572:0 NM_001371774:0 NM_001371772:0 AK057266:0 AK292186:0 AK093333:0 BC034776:-7 HQ447306:9 KJ895698:9 KJ905630:9 CU689970:9 AK093446:-18 ENST00000476719.1:-476 ENST00000477396.5:-476 BC037402:-476 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-62 |
|end=132878301 | |end=132878301 | ||
|end_of_center_position=132878282 | |end_of_center_position=132878282 | ||
|entrez_id=11092 | |entrez_id=11092 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=C9orf9 | + | |gene_alias=C9orf9{{!}}Mast |
|gene_description=sperm acrosome associated 9 | |gene_description=sperm acrosome associated 9 | ||
|gene_id=158067 | |gene_id=158067 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_018956 | |nearest_refseq=NM_018956 | ||
|nearest_unigene=Hs.62595 | |nearest_unigene=Hs.62595 | ||
| − | |num_trans= | + | |num_trans=18 |
|species=human | |species=human | ||
|start=132878262 | |start=132878262 | ||
|start_of_center_position=132878281 | |start_of_center_position=132878281 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AK057266 AK292186 AK093333 | + | |transcript_name=ENST00000298545.4 NM_001317959 NM_001317958 NM_152572 NM_001371774 NM_001371772 AK057266 AK292186 AK093333 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102913.1 | |tss_id=hg_102913.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q8N9Z7 | + | |uniprot_id=Q8N9Z7 Q96MA6 |
}} | }} | ||
Revision as of 17:14, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 132878281 |
|---|---|
| End of the center position in the TSS region: | 132878282 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000298545.4 NM_001317959 NM_001317958 NM_152572 NM_001371774 NM_001371772 AK057266 AK292186 AK093333 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000298545.4:0 NM_001317959:0 NM_001317958:0 NM_152572:0 NM_001371774:0 NM_001371772:0 AK057266:0 AK292186:0 AK093333:0 BC034776:-7 HQ447306:9 KJ895698:9 KJ905630:9 CU689970:9 AK093446:-18 ENST00000476719.1:-476 ENST00000477396.5:-476 BC037402:-476 |
TATA-Box annotation
| Distance to TSS: | -62 |
|---|---|
| Nearest PromoterID: | NM_001316898 |
| Entrez ID: | 11092 |
| Nearest Unigene: | Hs.62595 |
| Nearest Refseq: | NM_018956 |
| Nearest Ensembl: | ENSG00000165698 |
| Gene Name: | adenylate kinase 8 |
| Gene Alias: | C9orf9|Mast |
| Gene Description: | sperm acrosome associated 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
