Difference between revisions of "TSS:Hg 102919.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TSC= | |TSC= | ||
| − | |all_trans=ENST00000298552. | + | |all_trans=ENST00000298552.9:0 ENST00000642627.1:0 ENST00000643875.1:0 ENST00000642811.1:0 ENST00000647279.1:0 ENST00000642617.1:0 ENST00000643583.1:0 ENST00000644255.1:0 ENST00000643072.1:0 ENST00000647506.1:0 ENST00000642745.1:0 ENST00000642646.1:0 ENST00000647462.1:0 ENST00000475903.6:0 ENST00000645904.1:0 ENST00000490179.3:0 ENST00000646831.1:0 NM_001162427:0 NM_001362177:0 NM_001162426:0 NM_000368:0 AF013168:0 AK303030:0 AK308412:0 BC108668:0 AK297326:0 BC047772:0 ENST00000645901.1:-1 ENST00000646625.1:-3 ENST00000646391.1:-3 ENST00000645150.1:-3 ENST00000645129.1:-3 ENST00000403810.6:-3 ENST00000643691.1:-3 AK299654:-3 BC070032:-3 AB190910:6 BC121000:11 ENST00000642344.1:29 ENST00000644997.1:29 ENST00000646788.1:43 ENST00000645346.1:48 ENST00000642854.1:-64 ENST00000644097.1:-139 ENST00000642249.1:-204 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=132944630 | |end=132944630 | ||
|end_of_center_position=132944616 | |end_of_center_position=132944616 | ||
|entrez_id=7248 | |entrez_id=7248 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=LAM | + | |gene_alias=LAM{{!}}TSC |
| − | |gene_description= | + | |gene_description=TSC complex subunit 1 |
|gene_id=7248 | |gene_id=7248 | ||
| − | |gene_name= | + | |gene_name=TSC complex subunit 1 |
|gene_source=HGNC:12362 | |gene_source=HGNC:12362 | ||
|gene_symbol=TSC1 | |gene_symbol=TSC1 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:12362 | |hgnc_mgi_id=HGNC:12362 | ||
|nearest_ensembl=ENSG00000165699 | |nearest_ensembl=ENSG00000165699 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362177 |
|nearest_refseq=NM_000368 | |nearest_refseq=NM_000368 | ||
|nearest_unigene=Hs.370854 | |nearest_unigene=Hs.370854 | ||
| − | |num_trans= | + | |num_trans=45 |
|species=human | |species=human | ||
|start=132944600 | |start=132944600 | ||
|start_of_center_position=132944615 | |start_of_center_position=132944615 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000298552. | + | |transcript_name=ENST00000298552.9 ENST00000642627.1 ENST00000643875.1 ENST00000642811.1 ENST00000647279.1 ENST00000642617.1 ENST00000643583.1 ENST00000644255.1 ENST00000643072.1 ENST00000647506.1 ENST00000642745.1 ENST00000642646.1 ENST00000647462.1 ENST00000475903.6 ENST00000645904.1 ENST00000490179.3 ENST00000646831.1 NM_001162427 NM_001362177 NM_001162426 NM_000368 AF013168 AK303030 AK308412 BC108668 AK297326 BC047772 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102919.1 | |tss_id=hg_102919.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B7Z4G2 Q32NF0 X5D9D2 | + | |uniprot_id=A0A2R8Y419 A0A2R8Y5F8 A0A2R8Y5N2 A0A2R8Y5S3 A0A2R8Y6S8 A0A2R8Y6W1 A0A2R8YFV7 A0A2R8YGL0 B7Z4G2 Q32NF0 Q59IT9 Q92574 X5D9D2 |
}} | }} | ||
Revision as of 17:14, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 132944615 |
|---|---|
| End of the center position in the TSS region: | 132944616 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000298552.9 ENST00000642627.1 ENST00000643875.1 ENST00000642811.1 ENST00000647279.1 ENST00000642617.1 ENST00000643583.1 ENST00000644255.1 ENST00000643072.1 ENST00000647506.1 ENST00000642745.1 ENST00000642646.1 ENST00000647462.1 ENST00000475903.6 ENST00000645904.1 ENST00000490179.3 ENST00000646831.1 NM_001162427 NM_001362177 NM_001162426 NM_000368 AF013168 AK303030 AK308412 BC108668 AK297326 BC047772 |
|---|---|
| Distance: | 0 |
| Num_trans: | 45 |
| All_trans: | ENST00000298552.9:0 ENST00000642627.1:0 ENST00000643875.1:0 ENST00000642811.1:0 ENST00000647279.1:0 ENST00000642617.1:0 ENST00000643583.1:0 ENST00000644255.1:0 ENST00000643072.1:0 ENST00000647506.1:0 ENST00000642745.1:0 ENST00000642646.1:0 ENST00000647462.1:0 ENST00000475903.6:0 ENST00000645904.1:0 ENST00000490179.3:0 ENST00000646831.1:0 NM_001162427:0 NM_001362177:0 NM_001162426:0 NM_000368:0 AF013168:0 AK303030:0 AK308412:0 BC108668:0 AK297326:0 BC047772:0 ENST00000645901.1:-1 ENST00000646625.1:-3 ENST00000646391.1:-3 ENST00000645150.1:-3 ENST00000645129.1:-3 ENST00000403810.6:-3 ENST00000643691.1:-3 AK299654:-3 BC070032:-3 AB190910:6 BC121000:11 ENST00000642344.1:29 ENST00000644997.1:29 ENST00000646788.1:43 ENST00000645346.1:48 ENST00000642854.1:-64 ENST00000644097.1:-139 ENST00000642249.1:-204 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001362177 |
| Entrez ID: | 7248 |
| Nearest Unigene: | Hs.370854 |
| Nearest Refseq: | NM_000368 |
| Nearest Ensembl: | ENSG00000165699 |
| Gene Name: | TSC complex subunit 1 |
| Gene Alias: | LAM|TSC |
| Gene Description: | TSC complex subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
