Difference between revisions of "TSS:Hg 102971.1"
From referenceTSS
| Line 3: | Line 3: | ||
|GTB= | |GTB= | ||
|NAGAT= | |NAGAT= | ||
| − | |all_trans=AK095379:-337 | + | |all_trans=ENST00000680600.1:-32 AK095379:-337 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance=- | + | |distance=-32 |
| − | |distance_to_tss= | + | |distance_to_tss=22648 |
|end=133252565 | |end=133252565 | ||
|end_of_center_position=133252553 | |end_of_center_position=133252553 | ||
|entrez_id=28 | |entrez_id=28 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=A3GALNT | + | |gene_alias=A3GALNT{{!}}A3GALT1{{!}}GTB{{!}}NAGAT |
| − | |gene_description= | + | |gene_description=ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase |
| − | |gene_name=ABO | + | |gene_id=28 |
| + | |gene_name=ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase | ||
| + | |gene_source=HGNC:79 | ||
| + | |gene_symbol=ABO | ||
| + | |gene_synonyms=A3GALNT A3GALT1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:79 | ||
|nearest_ensembl=ENSG00000175164 | |nearest_ensembl=ENSG00000175164 | ||
|nearest_promoter_id=NM_020469 | |nearest_promoter_id=NM_020469 | ||
|nearest_refseq=NM_020469 | |nearest_refseq=NM_020469 | ||
|nearest_unigene=Hs.654423 | |nearest_unigene=Hs.654423 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=133252540 | |start=133252540 | ||
|start_of_center_position=133252552 | |start_of_center_position=133252552 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000680600.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102971.1 | |tss_id=hg_102971.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:16, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133252552 |
|---|---|
| End of the center position in the TSS region: | 133252553 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000680600.1 |
|---|---|
| Distance: | -32 |
| Num_trans: | 2 |
| All_trans: | ENST00000680600.1:-32 AK095379:-337 |
TATA-Box annotation
| Distance to TSS: | 22648 |
|---|---|
| Nearest PromoterID: | NM_020469 |
| Entrez ID: | 28 |
| Nearest Unigene: | Hs.654423 |
| Nearest Refseq: | NM_020469 |
| Nearest Ensembl: | ENSG00000175164 |
| Gene Name: | ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase |
| Gene Alias: | A3GALNT|A3GALT1|GTB|NAGAT |
| Gene Description: | ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
