Difference between revisions of "TSS:Hg 102975.1"
From referenceTSS
| Line 7: | Line 7: | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=34 | |distance=34 | ||
| − | |distance_to_tss= | + | |distance_to_tss=19658 |
|end=133255563 | |end=133255563 | ||
|end_of_center_position=133255543 | |end_of_center_position=133255543 | ||
|entrez_id=28 | |entrez_id=28 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=A3GALNT | + | |gene_alias=A3GALNT{{!}}A3GALT1{{!}}GTB{{!}}NAGAT |
| − | |gene_description= | + | |gene_description=ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase |
| − | |gene_name=ABO | + | |gene_id=28 |
| + | |gene_name=ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase | ||
| + | |gene_source=HGNC:79 | ||
| + | |gene_symbol=ABO | ||
| + | |gene_synonyms=A3GALNT A3GALT1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:79 | ||
|nearest_ensembl=ENSG00000175164 | |nearest_ensembl=ENSG00000175164 | ||
|nearest_promoter_id=NM_020469 | |nearest_promoter_id=NM_020469 | ||
| Line 29: | Line 34: | ||
|tss_id=hg_102975.1 | |tss_id=hg_102975.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:16, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133255542 |
|---|---|
| End of the center position in the TSS region: | 133255543 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK124587 |
|---|---|
| Distance: | 34 |
| Num_trans: | 3 |
| All_trans: | AK124587:34 U15197:-118 S44054:-129 |
TATA-Box annotation
| Distance to TSS: | 19658 |
|---|---|
| Nearest PromoterID: | NM_020469 |
| Entrez ID: | 28 |
| Nearest Unigene: | Hs.654423 |
| Nearest Refseq: | NM_020469 |
| Nearest Ensembl: | ENSG00000175164 |
| Gene Name: | ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase |
| Gene Alias: | A3GALNT|A3GALT1|GTB|NAGAT |
| Gene Description: | ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
