Difference between revisions of "TSS:Hg 102984.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AK054884:26 ENST00000372022.6:45 NM_006753:45 NR_103874:45 NM_001278942:45 BC014878:72 EU831789:92 EU831867:92 BC003001:96 BC006197:96 KJ892233:100 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| − | |distance= | + | |distance=26 |
| − | |distance_to_tss=- | + | |distance_to_tss=-48 |
|end=133336239 | |end=133336239 | ||
|end_of_center_position=133336236 | |end_of_center_position=133336236 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_006753 | |nearest_refseq=NM_006753 | ||
|nearest_unigene=Hs.274430 | |nearest_unigene=Hs.274430 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=133336232 | |start=133336232 | ||
|start_of_center_position=133336235 | |start_of_center_position=133336235 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK054884 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102984.1 | |tss_id=hg_102984.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B3KNS8 |
}} | }} | ||
Revision as of 17:16, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 133336235 |
|---|---|
| End of the center position in the TSS region: | 133336236 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK054884 |
|---|---|
| Distance: | 26 |
| Num_trans: | 11 |
| All_trans: | AK054884:26 ENST00000372022.6:45 NM_006753:45 NR_103874:45 NM_001278942:45 BC014878:72 EU831789:92 EU831867:92 BC003001:96 BC006197:96 KJ892233:100 |
TATA-Box annotation
| Distance to TSS: | -48 |
|---|---|
| Nearest PromoterID: | NM_006753 |
| Entrez ID: | 6838 |
| Nearest Unigene: | Hs.274430 |
| Nearest Refseq: | NM_006753 |
| Nearest Ensembl: | ENSG00000148296 |
| Gene Name: | surfeit 6 |
| Gene Alias: | RRP14 |
| Gene Description: | surfeit 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
