Difference between revisions of "TSS:Hg 103071.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=-75884 |entrez_id=414316 |gc_percent=0.616915 |gene_alias=C9orf104|bA54A22.4 |gene_description=COL5A1 antisense RNA 1 |gene_name...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |bA54A22.4= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| + | |distance=NA | ||
|distance_to_tss=-75884 | |distance_to_tss=-75884 | ||
| + | |end=134728752 | ||
| + | |end_of_center_position=134728728 | ||
|entrez_id=414316 | |entrez_id=414316 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=C9orf104 | + | |gene_alias=C9orf104{{!}}bA54A22.4 |
|gene_description=COL5A1 antisense RNA 1 | |gene_description=COL5A1 antisense RNA 1 | ||
|gene_name=COL5A1-AS1 | |gene_name=COL5A1-AS1 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000204011 |
|nearest_promoter_id=NR_138049 | |nearest_promoter_id=NR_138049 | ||
|nearest_refseq=NR_138049 | |nearest_refseq=NR_138049 | ||
|nearest_unigene=Hs.571561 | |nearest_unigene=Hs.571561 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=134728702 | ||
| + | |start_of_center_position=134728727 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103071.1 | |tss_id=hg_103071.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:18, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 134728727 |
|---|---|
| End of the center position in the TSS region: | 134728728 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -75884 |
|---|---|
| Nearest PromoterID: | NR_138049 |
| Entrez ID: | 414316 |
| Nearest Unigene: | Hs.571561 |
| Nearest Refseq: | NR_138049 |
| Nearest Ensembl: | ENSG00000204011 |
| Gene Name: | COL5A1-AS1 |
| Gene Alias: | C9orf104|bA54A22.4 |
| Gene Description: | COL5A1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.07 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
