Difference between revisions of "TSS:Hg 103095.1"
From referenceTSS
| Line 2: | Line 2: | ||
|MRP-S2= | |MRP-S2= | ||
|S2mt= | |S2mt= | ||
| − | |all_trans=ENST00000371791.5 | + | |all_trans=ENST00000371791.5:-471 BC021261:-471 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=-471 | |distance=-471 | ||
| − | |distance_to_tss= | + | |distance_to_tss=559 |
|end=135501263 | |end=135501263 | ||
|end_of_center_position=135501242 | |end_of_center_position=135501242 | ||
|entrez_id=51116 | |entrez_id=51116 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=CGI-91 | + | |gene_alias=CGI-91{{!}}COXPD36{{!}}MRP-S2{{!}}S2mt |
|gene_description=mitochondrial ribosomal protein S2 | |gene_description=mitochondrial ribosomal protein S2 | ||
|gene_id=138162 | |gene_id=138162 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:28435 | |hgnc_mgi_id=HGNC:28435 | ||
|nearest_ensembl=ENSG00000122140 | |nearest_ensembl=ENSG00000122140 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_051970 |
|nearest_refseq=NM_016034 | |nearest_refseq=NM_016034 | ||
|nearest_unigene=Hs.382044 | |nearest_unigene=Hs.382044 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=135501219 | |start=135501219 | ||
|start_of_center_position=135501241 | |start_of_center_position=135501241 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000371791.5 | + | |transcript_name=ENST00000371791.5 BC021261 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103095.1 | |tss_id=hg_103095.1 | ||
Revision as of 17:19, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 135501241 |
|---|---|
| End of the center position in the TSS region: | 135501242 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371791.5 BC021261 |
|---|---|
| Distance: | -471 |
| Num_trans: | 2 |
| All_trans: | ENST00000371791.5:-471 BC021261:-471 |
TATA-Box annotation
| Distance to TSS: | 559 |
|---|---|
| Nearest PromoterID: | NR_051970 |
| Entrez ID: | 51116 |
| Nearest Unigene: | Hs.382044 |
| Nearest Refseq: | NM_016034 |
| Nearest Ensembl: | ENSG00000122140 |
| Gene Name: | chromosome 9 open reading frame 116 |
| Gene Alias: | CGI-91|COXPD36|MRP-S2|S2mt |
| Gene Description: | mitochondrial ribosomal protein S2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
