Difference between revisions of "TSS:Hg 103150.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=23 |entrez_id=728489 |gc_percent=0.78607 |gene_alias=C9orf151|HEP|HEP1|TIMM15|ZIM17|bA413M3.2 |gene_description=DNL-type zinc f...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HEP= | ||
| + | |HEP1= | ||
| + | |TIMM15= | ||
| + | |ZIM17= | ||
| + | |all_trans=LF205596:-7 MA441173:-7 BC146915:-18 BC146924:-18 BC171835:-18 ENST00000371738.4:40 NM_001080849:40 NR_073565:40 ENST00000371739.3:65 LF346394:171 MA581971:171 LF346393:343 MA581970:343 | ||
| + | |bA413M3.2= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance_to_tss= | + | |distance=-7 |
| + | |distance_to_tss=-44 | ||
| + | |end=136363793 | ||
| + | |end_of_center_position=136363789 | ||
|entrez_id=728489 | |entrez_id=728489 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=C9orf151 | + | |gene_alias=C9orf151{{!}}HEP{{!}}HEP1{{!}}TIMM15{{!}}ZIM17{{!}}bA413M3.2 |
|gene_description=DNL-type zinc finger | |gene_description=DNL-type zinc finger | ||
| + | |gene_id=728489 | ||
|gene_name=DNLZ | |gene_name=DNLZ | ||
| + | |gene_source=HGNC:33879 | ||
| + | |gene_symbol=DNLZ | ||
| + | |gene_synonyms=HEP RP11-413M3.2 TIMM15 ZIM17 bA413M3.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:33879 | ||
|nearest_ensembl=ENSG00000213221 | |nearest_ensembl=ENSG00000213221 | ||
|nearest_promoter_id=NR_073565 | |nearest_promoter_id=NR_073565 | ||
|nearest_refseq=NM_001080849 | |nearest_refseq=NM_001080849 | ||
|nearest_unigene=Hs.528581 | |nearest_unigene=Hs.528581 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=136363783 | ||
| + | |start_of_center_position=136363788 | ||
| + | |strand=- | ||
| + | |transcript_name=LF205596 MA441173 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103150.1 | |tss_id=hg_103150.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5SXM8 | ||
}} | }} | ||
Latest revision as of 17:20, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136363788 |
|---|---|
| End of the center position in the TSS region: | 136363789 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF205596 MA441173 |
|---|---|
| Distance: | -7 |
| Num_trans: | 13 |
| All_trans: | LF205596:-7 MA441173:-7 BC146915:-18 BC146924:-18 BC171835:-18 ENST00000371738.4:40 NM_001080849:40 NR_073565:40 ENST00000371739.3:65 LF346394:171 MA581971:171 LF346393:343 MA581970:343 |
TATA-Box annotation
| Distance to TSS: | -44 |
|---|---|
| Nearest PromoterID: | NR_073565 |
| Entrez ID: | 728489 |
| Nearest Unigene: | Hs.528581 |
| Nearest Refseq: | NM_001080849 |
| Nearest Ensembl: | ENSG00000213221 |
| Gene Name: | DNLZ |
| Gene Alias: | C9orf151|HEP|HEP1|TIMM15|ZIM17|bA413M3.2 |
| Gene Description: | DNL-type zinc finger |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
