Difference between revisions of "TSS:Hg 103205.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|LCN5= | |LCN5= | ||
| − | |all_trans=ENST00000482893 | + | |all_trans=ENST00000482893.1:0 AK090647:0 ENST00000479767.1:76 BC024235:76 GQ891310:-370 HQ258567:-372 KJ895524:-372 ENST00000480597.5:478 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 10: | Line 10: | ||
|entrez_id=138307 | |entrez_id=138307 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=EP17 | + | |gene_alias=EP17{{!}}LCN5 |
|gene_description=lipocalin 8 | |gene_description=lipocalin 8 | ||
|gene_id=138307 | |gene_id=138307 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_178469 | |nearest_refseq=NM_178469 | ||
|nearest_unigene=Hs.323991 | |nearest_unigene=Hs.323991 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=136757532 | |start=136757532 | ||
|start_of_center_position=136757546 | |start_of_center_position=136757546 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000482893 | + | |transcript_name=ENST00000482893.1 AK090647 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103205.1 | |tss_id=hg_103205.1 | ||
Revision as of 17:21, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136757546 |
|---|---|
| End of the center position in the TSS region: | 136757547 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000482893.1 AK090647 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000482893.1:0 AK090647:0 ENST00000479767.1:76 BC024235:76 GQ891310:-370 HQ258567:-372 KJ895524:-372 ENST00000480597.5:478 |
TATA-Box annotation
| Distance to TSS: | 733 |
|---|---|
| Nearest PromoterID: | NM_178469 |
| Entrez ID: | 138307 |
| Nearest Unigene: | Hs.323991 |
| Nearest Refseq: | NM_178469 |
| Nearest Ensembl: | ENSG00000204001 |
| Gene Name: | lipocalin 8 |
| Gene Alias: | EP17|LCN5 |
| Gene Description: | lipocalin 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
