Difference between revisions of "TSS:Hg 103234.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=-285 |entrez_id=7186 |gc_percent=0.691542 |gene_alias=MGC:45012|TRAP|TRAP3 |gene_description=TNF receptor associated factor 2 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TRAP= | ||
| + | |TRAP3= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-288 | ||
| + | |end=136886234 | ||
| + | |end_of_center_position=136886229 | ||
|entrez_id=7186 | |entrez_id=7186 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=MGC:45012 | + | |gene_alias=MGC:45012{{!}}RNF117{{!}}TRAP{{!}}TRAP3 |
|gene_description=TNF receptor associated factor 2 | |gene_description=TNF receptor associated factor 2 | ||
|gene_name=TRAF2 | |gene_name=TRAF2 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_021138 | |nearest_refseq=NM_021138 | ||
|nearest_unigene=Hs.522506 | |nearest_unigene=Hs.522506 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=136886222 | ||
| + | |start_of_center_position=136886228 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103234.1 | |tss_id=hg_103234.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:22, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 136886228 |
|---|---|
| End of the center position in the TSS region: | 136886229 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -288 |
|---|---|
| Nearest PromoterID: | NM_021138 |
| Entrez ID: | 7186 |
| Nearest Unigene: | Hs.522506 |
| Nearest Refseq: | NM_021138 |
| Nearest Ensembl: | ENSG00000127191 |
| Gene Name: | TRAF2 |
| Gene Alias: | MGC:45012|RNF117|TRAP|TRAP3 |
| Gene Description: | TNF receptor associated factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
