Difference between revisions of "TSS:Hg 103239.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000480818.3 | + | |all_trans=ENST00000480818.3:18 JF432249:90 AB463628:90 CU676959:90 LF346331:187 MA581908:187 ENST00000443788.1:-326 AK026081:-410 ENST00000491246.4:-412 BC014297:-413 AK315738:-421 BC014130:-442 LF346330:-474 MA581907:-474 ENST00000428398.5:-479 ENST00000483559.5:-480 BC035355:-480 ENST00000459905.5:-488 BC031100:-488 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=18 | |distance=18 | ||
| − | |distance_to_tss= | + | |distance_to_tss=548 |
|end=136944208 | |end=136944208 | ||
|end_of_center_position=136944191 | |end_of_center_position=136944191 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018998 | |nearest_refseq=NM_018998 | ||
|nearest_unigene=Hs.522507 | |nearest_unigene=Hs.522507 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=136944172 | |start=136944172 | ||
|start_of_center_position=136944190 | |start_of_center_position=136944190 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000480818.3 | + | |transcript_name=ENST00000480818.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103239.1 | |tss_id=hg_103239.1 | ||
Revision as of 17:22, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 136944190 |
|---|---|
| End of the center position in the TSS region: | 136944191 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000480818.3 |
|---|---|
| Distance: | 18 |
| Num_trans: | 19 |
| All_trans: | ENST00000480818.3:18 JF432249:90 AB463628:90 CU676959:90 LF346331:187 MA581908:187 ENST00000443788.1:-326 AK026081:-410 ENST00000491246.4:-412 BC014297:-413 AK315738:-421 BC014130:-442 LF346330:-474 MA581907:-474 ENST00000428398.5:-479 ENST00000483559.5:-480 BC035355:-480 ENST00000459905.5:-488 BC031100:-488 |
TATA-Box annotation
| Distance to TSS: | 548 |
|---|---|
| Nearest PromoterID: | NM_018998 |
| Entrez ID: | 54461 |
| Nearest Unigene: | Hs.522507 |
| Nearest Refseq: | NM_018998 |
| Nearest Ensembl: | ENSG00000159069 |
| Gene Name: | F-box and WD repeat domain containing 5 |
| Gene Alias: | Fbw5 |
| Gene Description: | F-box and WD repeat domain containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
