Difference between revisions of "TSS:Hg 103241.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000443788 | + | |all_trans=ENST00000443788.1:17 AK026081:-50 ENST00000491246.4:-52 BC014297:-53 AK315738:-61 BC014130:-82 LF346330:-114 MA581907:-114 ENST00000428398.5:-119 ENST00000483559.5:-120 BC035355:-120 ENST00000459905.5:-128 BC031100:-128 ENST00000325285.8:-170 NM_018998:-170 LF205587:-202 MA441164:-202 ENST00000480818.3:396 JF432249:468 AB463628:468 CU676959:468 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=17 | |distance=17 | ||
| − | |distance_to_tss= | + | |distance_to_tss=179 |
|end=136944568 | |end=136944568 | ||
|end_of_center_position=136944560 | |end_of_center_position=136944560 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018998 | |nearest_refseq=NM_018998 | ||
|nearest_unigene=Hs.522507 | |nearest_unigene=Hs.522507 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=136944550 | |start=136944550 | ||
|start_of_center_position=136944559 | |start_of_center_position=136944559 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000443788 | + | |transcript_name=ENST00000443788.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103241.1 | |tss_id=hg_103241.1 | ||
Revision as of 17:22, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136944559 |
|---|---|
| End of the center position in the TSS region: | 136944560 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000443788.1 |
|---|---|
| Distance: | 17 |
| Num_trans: | 21 |
| All_trans: | ENST00000443788.1:17 AK026081:-50 ENST00000491246.4:-52 BC014297:-53 AK315738:-61 BC014130:-82 LF346330:-114 MA581907:-114 ENST00000428398.5:-119 ENST00000483559.5:-120 BC035355:-120 ENST00000459905.5:-128 BC031100:-128 ENST00000325285.8:-170 NM_018998:-170 LF205587:-202 MA441164:-202 ENST00000480818.3:396 JF432249:468 AB463628:468 CU676959:468 |
TATA-Box annotation
| Distance to TSS: | 179 |
|---|---|
| Nearest PromoterID: | NM_018998 |
| Entrez ID: | 54461 |
| Nearest Unigene: | Hs.522507 |
| Nearest Refseq: | NM_018998 |
| Nearest Ensembl: | ENSG00000159069 |
| Gene Name: | F-box and WD repeat domain containing 5 |
| Gene Alias: | Fbw5 |
| Gene Description: | F-box and WD repeat domain containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
