Difference between revisions of "TSS:Hg 103259.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AF102166:-109 ENST00000473911 | + | |all_trans=AF102166:-109 ENST00000473911.1:-113 HQ447985:-120 KJ892671:-120 ENST00000494426.2:-144 NM_004669:-144 BC007012:-144 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-109 | |distance=-109 | ||
| − | |distance_to_tss= | + | |distance_to_tss=150 |
|end=136996424 | |end=136996424 | ||
|end_of_center_position=136996419 | |end_of_center_position=136996419 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_004669 | |nearest_refseq=NM_004669 | ||
|nearest_unigene=Hs.64746 | |nearest_unigene=Hs.64746 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=136996412 | |start=136996412 | ||
|start_of_center_position=136996418 | |start_of_center_position=136996418 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-48(GCTTTTCTGGGC,+,0.00) |
|transcript_name=AF102166 | |transcript_name=AF102166 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 17:22, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136996418 |
|---|---|
| End of the center position in the TSS region: | 136996419 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF102166 |
|---|---|
| Distance: | -109 |
| Num_trans: | 7 |
| All_trans: | AF102166:-109 ENST00000473911.1:-113 HQ447985:-120 KJ892671:-120 ENST00000494426.2:-144 NM_004669:-144 BC007012:-144 |
TATA-Box annotation
| Distance to TSS: | 150 |
|---|---|
| Nearest PromoterID: | NM_004669 |
| Entrez ID: | 9022 |
| Nearest Unigene: | Hs.64746 |
| Nearest Refseq: | NM_004669 |
| Nearest Ensembl: | ENSG00000169583 |
| Gene Name: | chloride intracellular channel 3 |
| Gene Alias: | - |
| Gene Description: | chloride intracellular channel 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -48(GCTTTTCTGGGC,+,0.00) |
