Difference between revisions of "TSS:Hg 103263.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-2041 |entrez_id=9022 |gc_percent=0.542289 |gene_alias=- |gene_description=chloride intracellular channel 3 |gene_name=CLIC3 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-2045 | ||
| + | |end=136998620 | ||
| + | |end_of_center_position=136998613 | ||
|entrez_id=9022 | |entrez_id=9022 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_004669 | |nearest_refseq=NM_004669 | ||
|nearest_unigene=Hs.64746 | |nearest_unigene=Hs.64746 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=136998605 | ||
| + | |start_of_center_position=136998612 | ||
| + | |strand=- | ||
| + | |tata_box=-90(GCCCATATAAGG,-,0.00),-88(CCATATAAGGTC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103263.1 | |tss_id=hg_103263.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:22, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136998612 |
|---|---|
| End of the center position in the TSS region: | 136998613 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -2045 |
|---|---|
| Nearest PromoterID: | NM_004669 |
| Entrez ID: | 9022 |
| Nearest Unigene: | Hs.64746 |
| Nearest Refseq: | NM_004669 |
| Nearest Ensembl: | ENSG00000169583 |
| Gene Name: | CLIC3 |
| Gene Alias: | - |
| Gene Description: | chloride intracellular channel 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -90(GCCCATATAAGG,-,0.00),-88(CCATATAAGGTC,+,0.00) |
