Difference between revisions of "TSS:Hg 103263.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-2045 |
|end=136998620 | |end=136998620 | ||
|end_of_center_position=136998613 | |end_of_center_position=136998613 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=136998612 | |start_of_center_position=136998612 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-90(GCCCATATAAGG,-,0.00),-88(CCATATAAGGTC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:22, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136998612 |
|---|---|
| End of the center position in the TSS region: | 136998613 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -2045 |
|---|---|
| Nearest PromoterID: | NM_004669 |
| Entrez ID: | 9022 |
| Nearest Unigene: | Hs.64746 |
| Nearest Refseq: | NM_004669 |
| Nearest Ensembl: | ENSG00000169583 |
| Gene Name: | CLIC3 |
| Gene Alias: | - |
| Gene Description: | chloride intracellular channel 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -90(GCCCATATAAGG,-,0.00),-88(CCATATAAGGTC,+,0.00) |
