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Difference between revisions of "TSS:Hg 103276.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000470535.2:-334 uc064xhu.1:-334
+
|all_trans=ENST00000470535.2:-334
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 22: Line 22:
 
|nearest_refseq=NM_207511
 
|nearest_refseq=NM_207511
 
|nearest_unigene=Hs.522509
 
|nearest_unigene=Hs.522509
|num_trans=2
+
|num_trans=1
 
|species=human
 
|species=human
 
|start=137020459
 
|start=137020459
 
|start_of_center_position=137020465
 
|start_of_center_position=137020465
 
|strand=-
 
|strand=-
|transcript_name=ENST00000470535.2 uc064xhu.1
+
|transcript_name=ENST00000470535.2
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_103276.1
 
|tss_id=hg_103276.1

Revision as of 17:23, 15 June 2021

Basic information about the TSS


TSS ID:hg_103276.1
Species:human
Chr:chr9
TSS Classification:yes
Start:137020459
End:137020471
Strand:-
TSS Score:1
Start of the center position in the TSS region:137020465
End of the center position in the TSS region:137020466



Gene and protein annotation


Transcript_name:ENST00000470535.2
Distance:-334
GeneID:20
HGNC/MGI_ID:HGNC:32
UniProt_ID:H7C5M6
Gene_name:ATP binding cassette subfamily A member 2
Gene_symbol:ABCA2
Gene_synonyms:
Gene_source:HGNC:32



Transcript annotation


Transcript_name:ENST00000470535.2
Distance:-334
Num_trans:1
All_trans:ENST00000470535.2:-334



TATA-Box annotation


Distance to TSS:-6999
Nearest PromoterID:NM_207511
Entrez ID:401563
Nearest Unigene:Hs.522509
Nearest Refseq:NM_207511
Nearest Ensembl:
Gene Name:ATP binding cassette subfamily A member 2
Gene Alias:-
Gene Description:chromosome 9 open reading frame 139
Gene Type:protein-coding
CpG%:0.075
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):