Difference between revisions of "TSS:Hg 103281.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000494046.5:0 AF178941:0 AK308738:0 ENST00000464876.5:2 BC090860:2 BC064542:4 ENST00000492260.5:9 BC029282:9 ENST00000341511.11:-31 NM_001606:-31 AF327657:34 AB384556:36 ENST00000265662.9:-82 ENST00000371605.7:-82 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=44 |
|end=137028206 | |end=137028206 | ||
|end_of_center_position=137028193 | |end_of_center_position=137028193 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001606 | |nearest_refseq=NM_001606 | ||
|nearest_unigene=Hs.421202 | |nearest_unigene=Hs.421202 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=137028179 | |start=137028179 | ||
|start_of_center_position=137028192 | |start_of_center_position=137028192 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000494046.5 AF178941 AK308738 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103281.1 | |tss_id=hg_103281.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:23, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 137028192 |
|---|---|
| End of the center position in the TSS region: | 137028193 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000494046.5 AF178941 AK308738 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000494046.5:0 AF178941:0 AK308738:0 ENST00000464876.5:2 BC090860:2 BC064542:4 ENST00000492260.5:9 BC029282:9 ENST00000341511.11:-31 NM_001606:-31 AF327657:34 AB384556:36 ENST00000265662.9:-82 ENST00000371605.7:-82 |
TATA-Box annotation
| Distance to TSS: | 44 |
|---|---|
| Nearest PromoterID: | NM_001606 |
| Entrez ID: | 20 |
| Nearest Unigene: | Hs.421202 |
| Nearest Refseq: | NM_001606 |
| Nearest Ensembl: | ENSG00000107331 |
| Gene Name: | ATP binding cassette subfamily A member 2 |
| Gene Alias: | ABC2 |
| Gene Description: | ATP binding cassette subfamily A member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
