Difference between revisions of "TSS:Hg 103296.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.165 |distance_to_tss=257 |entrez_id=56654 |gc_percent=0.810945 |gene_alias=CAB|CAB-|CAB-1|CAB1|NPDC-1 |gene_description="neural proliferation, diffe...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CAB-= | ||
| + | |CAB-1= | ||
| + | |CAB1= | ||
| + | |NPDC-1= | ||
| + | |all_trans=KJ894338:-18 AK225091:-56 ENST00000488145.1:-85 AF272357:-100 BC004217:-137 AF327349:-185 ENST00000371601.5:-206 NM_015392:-206 AK074793:-206 ENST00000485589.1:-208 AF285836:-232 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| − | |distance_to_tss= | + | |distance=-18 |
| + | |distance_to_tss=210 | ||
| + | |end=137045971 | ||
| + | |end_of_center_position=137045967 | ||
|entrez_id=56654 | |entrez_id=56654 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=CAB | + | |gene_alias=CAB{{!}}CAB-{{!}}CAB-1{{!}}CAB1{{!}}NPDC-1 |
| − | |gene_description= | + | |gene_description=neural proliferation, differentiation and control 1 |
|gene_name=NPDC1 | |gene_name=NPDC1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 12: | Line 21: | ||
|nearest_refseq=NM_015392 | |nearest_refseq=NM_015392 | ||
|nearest_unigene=Hs.719906 | |nearest_unigene=Hs.719906 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=137045962 | ||
| + | |start_of_center_position=137045966 | ||
| + | |strand=- | ||
| + | |transcript_name=KJ894338 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103296.1 | |tss_id=hg_103296.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:23, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 137045966 |
|---|---|
| End of the center position in the TSS region: | 137045967 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | KJ894338 |
|---|---|
| Distance: | -18 |
| Num_trans: | 11 |
| All_trans: | KJ894338:-18 AK225091:-56 ENST00000488145.1:-85 AF272357:-100 BC004217:-137 AF327349:-185 ENST00000371601.5:-206 NM_015392:-206 AK074793:-206 ENST00000485589.1:-208 AF285836:-232 |
TATA-Box annotation
| Distance to TSS: | 210 |
|---|---|
| Nearest PromoterID: | NM_015392 |
| Entrez ID: | 56654 |
| Nearest Unigene: | Hs.719906 |
| Nearest Refseq: | NM_015392 |
| Nearest Ensembl: | ENSG00000107281 |
| Gene Name: | NPDC1 |
| Gene Alias: | CAB|CAB-|CAB-1|CAB1|NPDC-1 |
| Gene Description: | neural proliferation, differentiation and control 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
