Difference between revisions of "TSS:Hg 103310.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=-9432 |entrez_id=2902 |gc_percent=0.676617 |gene_alias=GluN1|MRD8|NMD-R1|NMDA1|NMDAR1|NR1 |gene_description=glutamate ionotropi...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MRD8= | ||
| + | |NMD-R1= | ||
| + | |NMDA1= | ||
| + | |NMDAR1= | ||
| + | |NR1= | ||
| + | |all_trans=BC018639:-107 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| − | |distance_to_tss=- | + | |distance=-107 |
| + | |distance_to_tss=-9429 | ||
| + | |end=137129753 | ||
| + | |end_of_center_position=137129726 | ||
|entrez_id=2902 | |entrez_id=2902 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=GluN1 | + | |gene_alias=GluN1{{!}}MRD8{{!}}NDHMSD{{!}}NDHMSR{{!}}NMD-R1{{!}}NMDA1{{!}}NMDAR1{{!}}NR1 |
|gene_description=glutamate ionotropic receptor NMDA type subunit 1 | |gene_description=glutamate ionotropic receptor NMDA type subunit 1 | ||
|gene_name=GRIN1 | |gene_name=GRIN1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000176884 | |nearest_ensembl=ENSG00000176884 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_007327 |
|nearest_refseq=NM_000832 | |nearest_refseq=NM_000832 | ||
|nearest_unigene=Hs.558334 | |nearest_unigene=Hs.558334 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=137129697 | ||
| + | |start_of_center_position=137129725 | ||
| + | |strand=- | ||
| + | |transcript_name=BC018639 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103310.1 | |tss_id=hg_103310.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:24, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 137129725 |
|---|---|
| End of the center position in the TSS region: | 137129726 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC018639 |
|---|---|
| Distance: | -107 |
| Num_trans: | 1 |
| All_trans: | BC018639:-107 |
TATA-Box annotation
| Distance to TSS: | -9429 |
|---|---|
| Nearest PromoterID: | NM_007327 |
| Entrez ID: | 2902 |
| Nearest Unigene: | Hs.558334 |
| Nearest Refseq: | NM_000832 |
| Nearest Ensembl: | ENSG00000176884 |
| Gene Name: | GRIN1 |
| Gene Alias: | GluN1|MRD8|NDHMSD|NDHMSR|NMD-R1|NMDA1|NMDAR1|NR1 |
| Gene Description: | glutamate ionotropic receptor NMDA type subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
