Difference between revisions of "TSS:Hg 103325.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000371542.3:0 | + | |all_trans=ENST00000371542.3:0 NM_001013653:0 LF212872:-32 MA448449:-32 BC140911:37 DQ355157:70 |
|bA350O14.10= | |bA350O14.10= | ||
|chr=chr9 | |chr=chr9 | ||
| Line 10: | Line 10: | ||
|entrez_id=389816 | |entrez_id=389816 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=CAPC | + | |gene_alias=CAPC{{!}}bA350O14.10 |
|gene_description=leucine rich repeat containing 26 | |gene_description=leucine rich repeat containing 26 | ||
|gene_id=389816 | |gene_id=389816 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001013653 | |nearest_refseq=NM_001013653 | ||
|nearest_unigene=Hs.669977 | |nearest_unigene=Hs.669977 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=137170044 | |start=137170044 | ||
|start_of_center_position=137170051 | |start_of_center_position=137170051 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000371542.3 | + | |transcript_name=ENST00000371542.3 NM_001013653 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103325.1 | |tss_id=hg_103325.1 | ||
Revision as of 17:24, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137170051 |
|---|---|
| End of the center position in the TSS region: | 137170052 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371542.3 NM_001013653 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000371542.3:0 NM_001013653:0 LF212872:-32 MA448449:-32 BC140911:37 DQ355157:70 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_001013653 |
| Entrez ID: | 389816 |
| Nearest Unigene: | Hs.669977 |
| Nearest Refseq: | NM_001013653 |
| Nearest Ensembl: | ENSG00000184709 |
| Gene Name: | leucine rich repeat containing 26 |
| Gene Alias: | CAPC|bA350O14.10 |
| Gene Description: | leucine rich repeat containing 26 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
