Difference between revisions of "TSS:Hg 103360.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=15943 |entrez_id=54932 |gc_percent=0.736318 |gene_alias=mut-7 |gene_description=exonuclease 3'-5' domain containing 3 |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=15843 | ||
| + | |end=137407323 | ||
| + | |end_of_center_position=137407320 | ||
|entrez_id=54932 | |entrez_id=54932 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000187609 | |nearest_ensembl=ENSG00000187609 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_104598 |
|nearest_refseq=NM_017820 | |nearest_refseq=NM_017820 | ||
|nearest_unigene=Hs.495553 | |nearest_unigene=Hs.495553 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=137407315 | ||
| + | |start_of_center_position=137407319 | ||
| + | |strand=- | ||
| + | |tata_box=-33(CGGTATTTAGGG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103360.1 | |tss_id=hg_103360.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:25, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 137407319 |
|---|---|
| End of the center position in the TSS region: | 137407320 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 15843 |
|---|---|
| Nearest PromoterID: | NR_104598 |
| Entrez ID: | 54932 |
| Nearest Unigene: | Hs.495553 |
| Nearest Refseq: | NM_017820 |
| Nearest Ensembl: | ENSG00000187609 |
| Gene Name: | EXD3 |
| Gene Alias: | mut-7 |
| Gene Description: | exonuclease 3'-5' domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(CGGTATTTAGGG,-,0.00) |
