Difference between revisions of "TSS:Hg 103380.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NELF= | |NELF= | ||
| − | |all_trans= | + | |all_trans=AK027474:46 AK316046:-57 AK294320:84 AK303703:126 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 10: | Line 10: | ||
|entrez_id=26012 | |entrez_id=26012 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=HH9 | + | |gene_alias=HH9{{!}}NELF |
|gene_description=NMDA receptor synaptonuclear signaling and neuronal migration factor | |gene_description=NMDA receptor synaptonuclear signaling and neuronal migration factor | ||
|gene_id=26012 | |gene_id=26012 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_015537 | |nearest_refseq=NM_015537 | ||
|nearest_unigene=Hs.455336 | |nearest_unigene=Hs.455336 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=137457582 | |start=137457582 | ||
|start_of_center_position=137457588 | |start_of_center_position=137457588 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK027474 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103380.1 | |tss_id=hg_103380.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:25, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137457588 |
|---|---|
| End of the center position in the TSS region: | 137457589 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK027474 |
|---|---|
| Distance: | 46 |
| Num_trans: | 4 |
| All_trans: | AK027474:46 AK316046:-57 AK294320:84 AK303703:126 |
TATA-Box annotation
| Distance to TSS: | 1746 |
|---|---|
| Nearest PromoterID: | NM_001130971 |
| Entrez ID: | 26012 |
| Nearest Unigene: | Hs.455336 |
| Nearest Refseq: | NM_015537 |
| Nearest Ensembl: | ENSG00000165802 |
| Gene Name: | NMDA receptor synaptonuclear signaling and neuronal migration factor |
| Gene Alias: | HH9|NELF |
| Gene Description: | NMDA receptor synaptonuclear signaling and neuronal migration factor |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
