Difference between revisions of "TSS:Hg 103396.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000421194.3:18 AK125987:302 | + | |all_trans=ENST00000421194.3:18 NR_147508:302 AK125987:302 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=18 | |distance=18 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-311 |
|end=137788726 | |end=137788726 | ||
|end_of_center_position=137788717 | |end_of_center_position=137788717 | ||
| − | |entrez_id= | + | |entrez_id=651337 |
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=uncharacterized LOC651337 |
| − | |gene_name= | + | |gene_id=651337 |
| + | |gene_name=uncharacterized LOC651337 | ||
| + | |gene_source=EntrezGene:651337 | ||
| + | |gene_symbol=LOC651337 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id= |
| − | |nearest_promoter_id= | + | |nearest_ensembl=ENSG00000255585 |
| − | |nearest_refseq= | + | |nearest_promoter_id=NR_147508 |
| − | |nearest_unigene=Hs. | + | |nearest_refseq=NR_147508 |
| − | |num_trans= | + | |nearest_unigene=Hs.603195 |
| + | |num_trans=3 | ||
|species=human | |species=human | ||
|start=137788707 | |start=137788707 | ||
| Line 26: | Line 31: | ||
|tss_id=hg_103396.1 | |tss_id=hg_103396.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:25, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137788716 |
|---|---|
| End of the center position in the TSS region: | 137788717 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000421194.3 |
|---|---|
| Distance: | 18 |
| Num_trans: | 3 |
| All_trans: | ENST00000421194.3:18 NR_147508:302 AK125987:302 |
TATA-Box annotation
| Distance to TSS: | -311 |
|---|---|
| Nearest PromoterID: | NR_147508 |
| Entrez ID: | 651337 |
| Nearest Unigene: | Hs.603195 |
| Nearest Refseq: | NR_147508 |
| Nearest Ensembl: | ENSG00000255585 |
| Gene Name: | uncharacterized LOC651337 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC651337 |
| Gene Type: | ncRNA |
| CpG%: | 0.105 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
