Difference between revisions of "TSS:Hg 103397.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Cav2.2= | |Cav2.2= | ||
|DYT23= | |DYT23= | ||
| + | |all_trans=ENST00000587008.2:0 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss=- | + | |distance_to_tss=-1088 |
|end=137876695 | |end=137876695 | ||
|end_of_center_position=137876694 | |end_of_center_position=137876694 | ||
|entrez_id=774 | |entrez_id=774 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=BIII | + | |gene_alias=BIII{{!}}CACNL1A5{{!}}CACNN{{!}}Cav2.2{{!}}DYT23 |
|gene_description=calcium voltage-gated channel subunit alpha1 B | |gene_description=calcium voltage-gated channel subunit alpha1 B | ||
| − | |gene_name= | + | |gene_id=100133077 |
| + | |gene_name=uncharacterized LOC100133077 | ||
| + | |gene_source=EntrezGene:100133077 | ||
| + | |gene_symbol=LOC100133077 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000148408 | |nearest_ensembl=ENSG00000148408 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000718 |
|nearest_refseq=NM_000718 | |nearest_refseq=NM_000718 | ||
|nearest_unigene=Hs.495522 | |nearest_unigene=Hs.495522 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=137876692 | |start=137876692 | ||
|start_of_center_position=137876693 | |start_of_center_position=137876693 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000587008.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103397.1 | |tss_id=hg_103397.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:25, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137876693 |
|---|---|
| End of the center position in the TSS region: | 137876694 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000587008.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | ENST00000587008.2:0 |
TATA-Box annotation
| Distance to TSS: | -1088 |
|---|---|
| Nearest PromoterID: | NM_000718 |
| Entrez ID: | 774 |
| Nearest Unigene: | Hs.495522 |
| Nearest Refseq: | NM_000718 |
| Nearest Ensembl: | ENSG00000148408 |
| Gene Name: | uncharacterized LOC100133077 |
| Gene Alias: | BIII|CACNL1A5|CACNN|Cav2.2|DYT23 |
| Gene Description: | calcium voltage-gated channel subunit alpha1 B |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
