Difference between revisions of "TSS:Hg 103400.1"
From referenceTSS
| Line 2: | Line 2: | ||
|BS69= | |BS69= | ||
|MRD30= | |MRD30= | ||
| − | |all_trans=ENST00000439456.5:34 ENST00000397962. | + | |all_trans=ENST00000439456.5:34 ENST00000397962.8:34 ENST00000309776.8:53 ENST00000397959.7:53 NM_006624:53 NM_001370119:53 NM_001370118:53 NM_001370105:53 NM_001370104:-132 NR_163254:-132 ENST00000509513.6:272 BC034784:272 AK312570:297 NM_001330057:369 NM_001370124:369 NM_001370122:369 NM_001202465:369 NM_001202466:369 NM_001370120:369 NM_001370116:369 NM_001370115:369 NM_001370113:369 NM_001370098:369 NM_001370107:369 NM_001370097:369 NM_001370106:369 NM_212479:369 AK294469:371 AK294781:371 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 11: | Line 11: | ||
|entrez_id=10771 | |entrez_id=10771 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=BRAM1 | + | |gene_alias=BRAM1{{!}}BS69{{!}}MRD30 |
|gene_description=zinc finger MYND-type containing 11 | |gene_description=zinc finger MYND-type containing 11 | ||
|gene_id=10771 | |gene_id=10771 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_006624 | |nearest_refseq=NM_006624 | ||
|nearest_unigene=Hs.292265 | |nearest_unigene=Hs.292265 | ||
| − | |num_trans= | + | |num_trans=29 |
|species=human | |species=human | ||
|start=134424 | |start=134424 | ||
|start_of_center_position=134427 | |start_of_center_position=134427 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000439456.5 ENST00000397962 | + | |transcript_name=ENST00000439456.5 ENST00000397962.8 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103400.1 | |tss_id=hg_103400.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=E9PE09 Q15326 |
}} | }} | ||
Revision as of 17:26, 15 June 2021
Basic information about the TSS
|
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| Start of the center position in the TSS region: | 134427 |
|---|---|
| End of the center position in the TSS region: | 134428 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000439456.5 ENST00000397962.8 |
|---|---|
| Distance: | 34 |
| Num_trans: | 29 |
| All_trans: | ENST00000439456.5:34 ENST00000397962.8:34 ENST00000309776.8:53 ENST00000397959.7:53 NM_006624:53 NM_001370119:53 NM_001370118:53 NM_001370105:53 NM_001370104:-132 NR_163254:-132 ENST00000509513.6:272 BC034784:272 AK312570:297 NM_001330057:369 NM_001370124:369 NM_001370122:369 NM_001202465:369 NM_001202466:369 NM_001370120:369 NM_001370116:369 NM_001370115:369 NM_001370113:369 NM_001370098:369 NM_001370107:369 NM_001370097:369 NM_001370106:369 NM_212479:369 AK294469:371 AK294781:371 |
TATA-Box annotation
| Distance to TSS: | -37 |
|---|---|
| Nearest PromoterID: | NM_006624 |
| Entrez ID: | 10771 |
| Nearest Unigene: | Hs.292265 |
| Nearest Refseq: | NM_006624 |
| Nearest Ensembl: | ENSG00000015171 |
| Gene Name: | zinc finger MYND-type containing 11 |
| Gene Alias: | BRAM1|BS69|MRD30 |
| Gene Description: | zinc finger MYND-type containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
