Difference between revisions of "TSS:Hg 103401.1"
From referenceTSS
| Line 2: | Line 2: | ||
|BS69= | |BS69= | ||
|MRD30= | |MRD30= | ||
| − | |all_trans= | + | |all_trans=ENST00000309776.8:0 ENST00000397959.7:0 NM_006624:0 NM_001370119:0 NM_001370118:0 NM_001370105:0 ENST00000439456.5:-12 ENST00000397962.8:-12 NM_001370104:-184 NR_163254:-184 ENST00000509513.6:214 BC034784:214 AK312570:239 NM_001330057:311 NM_001370124:311 NM_001370122:311 NM_001202465:311 NM_001202466:311 NM_001370120:311 NM_001370116:311 NM_001370115:311 NM_001370113:311 NM_001370098:311 NM_001370107:311 NM_001370097:311 NM_001370106:311 NM_212479:311 AK294469:313 AK294781:313 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 11: | Line 11: | ||
|entrez_id=10771 | |entrez_id=10771 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=BRAM1 | + | |gene_alias=BRAM1{{!}}BS69{{!}}MRD30 |
|gene_description=zinc finger MYND-type containing 11 | |gene_description=zinc finger MYND-type containing 11 | ||
|gene_id=10771 | |gene_id=10771 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:16966 | |hgnc_mgi_id=HGNC:16966 | ||
|nearest_ensembl=ENSG00000015171 | |nearest_ensembl=ENSG00000015171 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001370119 |
|nearest_refseq=NM_006624 | |nearest_refseq=NM_006624 | ||
|nearest_unigene=Hs.292265 | |nearest_unigene=Hs.292265 | ||
| − | |num_trans= | + | |num_trans=29 |
|species=human | |species=human | ||
|start=134476 | |start=134476 | ||
|start_of_center_position=134482 | |start_of_center_position=134482 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000309776.8 ENST00000397959.7 NM_006624 NM_001370119 NM_001370118 NM_001370105 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103401.1 | |tss_id=hg_103401.1 | ||
Revision as of 17:26, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 134482 |
|---|---|
| End of the center position in the TSS region: | 134483 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000309776.8 ENST00000397959.7 NM_006624 NM_001370119 NM_001370118 NM_001370105 |
|---|---|
| Distance: | 0 |
| Num_trans: | 29 |
| All_trans: | ENST00000309776.8:0 ENST00000397959.7:0 NM_006624:0 NM_001370119:0 NM_001370118:0 NM_001370105:0 ENST00000439456.5:-12 ENST00000397962.8:-12 NM_001370104:-184 NR_163254:-184 ENST00000509513.6:214 BC034784:214 AK312570:239 NM_001330057:311 NM_001370124:311 NM_001370122:311 NM_001202465:311 NM_001202466:311 NM_001370120:311 NM_001370116:311 NM_001370115:311 NM_001370113:311 NM_001370098:311 NM_001370107:311 NM_001370097:311 NM_001370106:311 NM_212479:311 AK294469:313 AK294781:313 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001370119 |
| Entrez ID: | 10771 |
| Nearest Unigene: | Hs.292265 |
| Nearest Refseq: | NM_006624 |
| Nearest Ensembl: | ENSG00000015171 |
| Gene Name: | zinc finger MYND-type containing 11 |
| Gene Alias: | BRAM1|BS69|MRD30 |
| Gene Description: | zinc finger MYND-type containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
