Difference between revisions of "TSS:Hg 103403.1"
From referenceTSS
| Line 2: | Line 2: | ||
|BS69= | |BS69= | ||
|MRD30= | |MRD30= | ||
| − | |all_trans=AK294469:-58 AK294781:-58 AK312570:-132 ENST00000509513.6 | + | |all_trans=AK294469:-58 AK294781:-58 NM_001330057:-60 NM_001370124:-60 NM_001370122:-60 NM_001202465:-60 NM_001202466:-60 NM_001370120:-60 NM_001370116:-60 NM_001370115:-60 NM_001370113:-60 NM_001370098:-60 NM_001370107:-60 NM_001370097:-60 NM_001370106:-60 NM_212479:-60 AK312570:-132 ENST00000509513.6:-157 BC034784:-157 ENST00000381591.5:198 ENST00000309776.8:-376 ENST00000397959.7:-376 NM_006624:-376 NM_001370119:-376 NM_001370118:-376 NM_001370105:-376 NM_001370114:394 NM_001370111:394 NM_001370110:394 NM_001370099:394 NM_001370108:394 ENST00000439456.5:-395 ENST00000397962.8:-395 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=-58 | |distance=-58 | ||
| − | |distance_to_tss= | + | |distance_to_tss=65 |
|end=134871 | |end=134871 | ||
|end_of_center_position=134866 | |end_of_center_position=134866 | ||
|entrez_id=10771 | |entrez_id=10771 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=BRAM1 | + | |gene_alias=BRAM1{{!}}BS69{{!}}MRD30 |
|gene_description=zinc finger MYND-type containing 11 | |gene_description=zinc finger MYND-type containing 11 | ||
|gene_id=10771 | |gene_id=10771 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:16966 | |hgnc_mgi_id=HGNC:16966 | ||
|nearest_ensembl=ENSG00000015171 | |nearest_ensembl=ENSG00000015171 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001370107 |
|nearest_refseq=NM_006624 | |nearest_refseq=NM_006624 | ||
|nearest_unigene=Hs.292265 | |nearest_unigene=Hs.292265 | ||
| − | |num_trans= | + | |num_trans=33 |
|species=human | |species=human | ||
|start=134859 | |start=134859 | ||
Revision as of 17:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 134865 |
|---|---|
| End of the center position in the TSS region: | 134866 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK294469 AK294781 |
|---|---|
| Distance: | -58 |
| Num_trans: | 33 |
| All_trans: | AK294469:-58 AK294781:-58 NM_001330057:-60 NM_001370124:-60 NM_001370122:-60 NM_001202465:-60 NM_001202466:-60 NM_001370120:-60 NM_001370116:-60 NM_001370115:-60 NM_001370113:-60 NM_001370098:-60 NM_001370107:-60 NM_001370097:-60 NM_001370106:-60 NM_212479:-60 AK312570:-132 ENST00000509513.6:-157 BC034784:-157 ENST00000381591.5:198 ENST00000309776.8:-376 ENST00000397959.7:-376 NM_006624:-376 NM_001370119:-376 NM_001370118:-376 NM_001370105:-376 NM_001370114:394 NM_001370111:394 NM_001370110:394 NM_001370099:394 NM_001370108:394 ENST00000439456.5:-395 ENST00000397962.8:-395 |
TATA-Box annotation
| Distance to TSS: | 65 |
|---|---|
| Nearest PromoterID: | NM_001370107 |
| Entrez ID: | 10771 |
| Nearest Unigene: | Hs.292265 |
| Nearest Refseq: | NM_006624 |
| Nearest Ensembl: | ENSG00000015171 |
| Gene Name: | zinc finger MYND-type containing 11 |
| Gene Alias: | BRAM1|BS69|MRD30 |
| Gene Description: | zinc finger MYND-type containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
