Difference between revisions of "TSS:Hg 103409.1"
From referenceTSS
| Line 2: | Line 2: | ||
|BS69= | |BS69= | ||
|MRD30= | |MRD30= | ||
| − | |all_trans=ENST00000402736.5:-5 | + | |all_trans=ENST00000397955.7:0 ENST00000402736.5:-5 ENST00000627286.2:-6 ENST00000403354.5:-30 ENST00000381607.8:-30 BC091489:-30 ENST00000602682.6:-42 ENST00000381604.9:-59 NM_001370121:-59 NM_001370123:-59 NM_001202464:-59 NM_001370117:-59 NM_001370112:-59 NM_001370100:-59 NM_001370101:66 NM_001370114:-249 NM_001370111:-249 NM_001370110:-249 NM_001370099:-249 NM_001370108:-249 NM_001370109:277 NM_001370102:277 ENST00000381591.5:-445 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=39 | |distance_to_tss=39 | ||
|end=135532 | |end=135532 | ||
| Line 11: | Line 11: | ||
|entrez_id=10771 | |entrez_id=10771 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
| − | |gene_alias=BRAM1 | + | |gene_alias=BRAM1{{!}}BS69{{!}}MRD30 |
|gene_description=zinc finger MYND-type containing 11 | |gene_description=zinc finger MYND-type containing 11 | ||
|gene_id=10771 | |gene_id=10771 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_006624 | |nearest_refseq=NM_006624 | ||
|nearest_unigene=Hs.292265 | |nearest_unigene=Hs.292265 | ||
| − | |num_trans= | + | |num_trans=23 |
|species=human | |species=human | ||
|start=135513 | |start=135513 | ||
|start_of_center_position=135522 | |start_of_center_position=135522 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000397955.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103409.1 | |tss_id=hg_103409.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=E7EV75 |
}} | }} | ||
Revision as of 17:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 135522 |
|---|---|
| End of the center position in the TSS region: | 135523 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000397955.7 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000397955.7:0 ENST00000402736.5:-5 ENST00000627286.2:-6 ENST00000403354.5:-30 ENST00000381607.8:-30 BC091489:-30 ENST00000602682.6:-42 ENST00000381604.9:-59 NM_001370121:-59 NM_001370123:-59 NM_001202464:-59 NM_001370117:-59 NM_001370112:-59 NM_001370100:-59 NM_001370101:66 NM_001370114:-249 NM_001370111:-249 NM_001370110:-249 NM_001370099:-249 NM_001370108:-249 NM_001370109:277 NM_001370102:277 ENST00000381591.5:-445 |
TATA-Box annotation
| Distance to TSS: | 39 |
|---|---|
| Nearest PromoterID: | NM_001202464 |
| Entrez ID: | 10771 |
| Nearest Unigene: | Hs.292265 |
| Nearest Refseq: | NM_006624 |
| Nearest Ensembl: | ENSG00000015171 |
| Gene Name: | zinc finger MYND-type containing 11 |
| Gene Alias: | BRAM1|BS69|MRD30 |
| Gene Description: | zinc finger MYND-type containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
