Difference between revisions of "TSS:Hg 103417.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=-108686 |entrez_id=102465753 |gc_percent=0.552239 |gene_alias=B-ATF|hsa-mir-7641-2 |gene_description=microRNA 7641-2 |gene_name=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance_to_tss= | + | |distance=NA |
| − | |entrez_id= | + | |distance_to_tss=210778 |
| + | |end=390777 | ||
| + | |end_of_center_position=390772 | ||
| + | |entrez_id=10771 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias= | + | |gene_alias=BRAM1{{!}}BS69{{!}}MRD30 |
| − | | | + | |gene_description=zinc finger MYND-type containing 11 |
| − | | | + | |gene_name=ZMYND11 |
| − | | | + | |gene_type=protein-coding |
| − | | | + | |hsa-mir-7641-2= |
| − | | | + | |nearest_ensembl=ENSG00000015171 |
| − | | | + | |nearest_promoter_id=NM_001202467 |
| − | | | + | |nearest_refseq=NM_006624 |
| − | |tata_box= | + | |nearest_unigene=Hs.292265 |
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=390766 | ||
| + | |start_of_center_position=390771 | ||
| + | |strand=+ | ||
| + | |tata_box=8(TCCTTTATGGCA,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103417.1 | |tss_id=hg_103417.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 390771 |
|---|---|
| End of the center position in the TSS region: | 390772 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 210778 |
|---|---|
| Nearest PromoterID: | NM_001202467 |
| Entrez ID: | 10771 |
| Nearest Unigene: | Hs.292265 |
| Nearest Refseq: | NM_006624 |
| Nearest Ensembl: | ENSG00000015171 |
| Gene Name: | ZMYND11 |
| Gene Alias: | BRAM1|BS69|MRD30 |
| Gene Description: | zinc finger MYND-type containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 8(TCCTTTATGGCA,+,0.00) |
