Difference between revisions of "TSS:Hg 103421.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000451601 | + | |all_trans=ENST00000451601.1:14 BC031269:14 AK090669:15 NR_147612:-16 BC045781:45 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=14 | |distance=14 | ||
| − | |distance_to_tss= | + | |distance_to_tss=38 |
|end=628624 | |end=628624 | ||
|end_of_center_position=628602 | |end_of_center_position=628602 | ||
| − | |entrez_id= | + | |entrez_id=101930421 |
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=uncharacterized LOC101930421 |
|gene_id=101930421 | |gene_id=101930421 | ||
|gene_name=uncharacterized LOC101930421 | |gene_name=uncharacterized LOC101930421 | ||
| Line 18: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000225140 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_147612 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_147612 |
| − | |nearest_unigene= | + | |nearest_unigene=Hs.654707 |
|num_trans=5 | |num_trans=5 | ||
|species=human | |species=human | ||
| Line 27: | Line 27: | ||
|start_of_center_position=628601 | |start_of_center_position=628601 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000451601 | + | |transcript_name=ENST00000451601.1 BC031269 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103421.1 | |tss_id=hg_103421.1 | ||
Revision as of 17:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 628601 |
|---|---|
| End of the center position in the TSS region: | 628602 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000451601.1 BC031269 |
|---|---|
| Distance: | 14 |
| Num_trans: | 5 |
| All_trans: | ENST00000451601.1:14 BC031269:14 AK090669:15 NR_147612:-16 BC045781:45 |
TATA-Box annotation
| Distance to TSS: | 38 |
|---|---|
| Nearest PromoterID: | NR_147612 |
| Entrez ID: | 101930421 |
| Nearest Unigene: | Hs.654707 |
| Nearest Refseq: | NR_147612 |
| Nearest Ensembl: | ENSG00000225140 |
| Gene Name: | uncharacterized LOC101930421 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101930421 |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
