Difference between revisions of "TSS:Hg 103423.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK296168:0 ENST00000381489.6 | + | |all_trans=NM_001355390:0 NM_001355388:0 AK296168:0 ENST00000381489.6:19 AK096013:19 BC144473:-45 ENST00000441152.3:-74 AK096000:-74 BC042561:210 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=5 |
|end=650058 | |end=650058 | ||
|end_of_center_position=650040 | |end_of_center_position=650040 | ||
| Line 12: | Line 12: | ||
|gene_description=proline rich 26 | |gene_description=proline rich 26 | ||
|gene_id=414235 | |gene_id=414235 | ||
| − | |gene_name= | + | |gene_name=DIP2C antisense RNA 1 |
|gene_source=HGNC:30724 | |gene_source=HGNC:30724 | ||
| − | |gene_symbol= | + | |gene_symbol=DIP2C-AS1 |
|gene_synonyms=FLJ38681 | |gene_synonyms=FLJ38681 | ||
| − | |gene_type= | + | |gene_type=protein-coding |
|hgnc_mgi_id=HGNC:30724 | |hgnc_mgi_id=HGNC:30724 | ||
|nearest_ensembl=ENSG00000180525 | |nearest_ensembl=ENSG00000180525 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001355390 |
|nearest_refseq=NM_001012714 | |nearest_refseq=NM_001012714 | ||
|nearest_unigene=Hs.587103 | |nearest_unigene=Hs.587103 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=650021 | |start=650021 | ||
|start_of_center_position=650039 | |start_of_center_position=650039 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AK296168 | + | |transcript_name=NM_001355390 NM_001355388 AK296168 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103423.1 | |tss_id=hg_103423.1 | ||
Revision as of 17:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 650039 |
|---|---|
| End of the center position in the TSS region: | 650040 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001355390 NM_001355388 AK296168 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | NM_001355390:0 NM_001355388:0 AK296168:0 ENST00000381489.6:19 AK096013:19 BC144473:-45 ENST00000441152.3:-74 AK096000:-74 BC042561:210 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_001355390 |
| Entrez ID: | 414235 |
| Nearest Unigene: | Hs.587103 |
| Nearest Refseq: | NM_001012714 |
| Nearest Ensembl: | ENSG00000180525 |
| Gene Name: | DIP2C antisense RNA 1 |
| Gene Alias: | C10orf108 |
| Gene Description: | proline rich 26 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
