Difference between revisions of "TSS:Hg 103428.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-1005 |entrez_id=23560 |gc_percent=0.462687 |gene_alias=CRFG|NGB|NOG1 |gene_description=GTP binding protein 4 |gene_name=GTPBP4...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NGB= | ||
| + | |NOG1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-1030 | ||
| + | |end=987406 | ||
| + | |end_of_center_position=987404 | ||
|entrez_id=23560 | |entrez_id=23560 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=CRFG | + | |gene_alias=CRFG{{!}}NGB{{!}}NOG1 |
|gene_description=GTP binding protein 4 | |gene_description=GTP binding protein 4 | ||
|gene_name=GTPBP4 | |gene_name=GTPBP4 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_012341 | |nearest_refseq=NM_012341 | ||
|nearest_unigene=Hs.215766 | |nearest_unigene=Hs.215766 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=987401 | ||
| + | |start_of_center_position=987403 | ||
| + | |strand=+ | ||
| + | |tata_box=-34(TTGTTTAAAAGG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103428.1 | |tss_id=hg_103428.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:26, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 987403 |
|---|---|
| End of the center position in the TSS region: | 987404 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -1030 |
|---|---|
| Nearest PromoterID: | NM_012341 |
| Entrez ID: | 23560 |
| Nearest Unigene: | Hs.215766 |
| Nearest Refseq: | NM_012341 |
| Nearest Ensembl: | ENSG00000107937 |
| Gene Name: | GTPBP4 |
| Gene Alias: | CRFG|NGB|NOG1 |
| Gene Description: | GTP binding protein 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(TTGTTTAAAAGG,-,0.00) |
