Difference between revisions of "TSS:Hg 103429.1"
From referenceTSS
| Line 2: | Line 2: | ||
|NGB= | |NGB= | ||
|NOG1= | |NOG1= | ||
| − | |all_trans=ENST00000491635.1:0 | + | |all_trans=ENST00000360803.9:0 ENST00000491635.1:0 NM_012341:0 BC008683:0 BC021243:0 AF120334:0 BC038975:0 AK097093:0 AK295231:0 AK001548:0 AK222861:0 KJ898511:6 AF325353:9 AK001552:-17 BC033784:28 AK302219:30 ENST00000360059.5:235 AK301721:244 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=14 |
|end=988471 | |end=988471 | ||
|end_of_center_position=988449 | |end_of_center_position=988449 | ||
|entrez_id=23560 | |entrez_id=23560 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=CRFG | + | |gene_alias=CRFG{{!}}NGB{{!}}NOG1 |
|gene_description=GTP binding protein 4 | |gene_description=GTP binding protein 4 | ||
|gene_id=23560 | |gene_id=23560 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_012341 | |nearest_refseq=NM_012341 | ||
|nearest_unigene=Hs.215766 | |nearest_unigene=Hs.215766 | ||
| − | |num_trans= | + | |num_trans=18 |
|species=human | |species=human | ||
|start=988425 | |start=988425 | ||
|start_of_center_position=988448 | |start_of_center_position=988448 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000491635.1 | + | |transcript_name=ENST00000360803.9 ENST00000491635.1 NM_012341 BC008683 BC021243 AF120334 BC038975 AK097093 AK295231 AK001548 AK222861 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103429.1 | |tss_id=hg_103429.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4DHR2 Q53GS0 | + | |uniprot_id=B4DHR2 D2CFK9 Q53GS0 Q9BZE4 |
}} | }} | ||
Revision as of 17:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 988448 |
|---|---|
| End of the center position in the TSS region: | 988449 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000360803.9 ENST00000491635.1 NM_012341 BC008683 BC021243 AF120334 BC038975 AK097093 AK295231 AK001548 AK222861 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000360803.9:0 ENST00000491635.1:0 NM_012341:0 BC008683:0 BC021243:0 AF120334:0 BC038975:0 AK097093:0 AK295231:0 AK001548:0 AK222861:0 KJ898511:6 AF325353:9 AK001552:-17 BC033784:28 AK302219:30 ENST00000360059.5:235 AK301721:244 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NM_012341 |
| Entrez ID: | 23560 |
| Nearest Unigene: | Hs.215766 |
| Nearest Refseq: | NM_012341 |
| Nearest Ensembl: | ENSG00000107937 |
| Gene Name: | GTP binding protein 4 |
| Gene Alias: | CRFG|NGB|NOG1 |
| Gene Description: | GTP binding protein 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
