Difference between revisions of "TSS:Hg 103430.1"
From referenceTSS
| Line 2: | Line 2: | ||
|NGB= | |NGB= | ||
|NOG1= | |NOG1= | ||
| − | |all_trans=AK301721:0 ENST00000360059.5 | + | |all_trans=AK301721:0 ENST00000360059.5:-2 AK302219:-207 BC033784:-209 AF325353:-228 KJ898511:-231 ENST00000491635.1:-246 AK097093:-246 AK295231:-246 AK001548:-246 AK222861:-246 BC038975:-249 AF120334:-251 BC021243:-258 BC008683:-261 ENST00000360803.9:-274 NM_012341:-274 AK001552:-299 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=280 |
|end=988720 | |end=988720 | ||
|end_of_center_position=988714 | |end_of_center_position=988714 | ||
|entrez_id=23560 | |entrez_id=23560 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=CRFG | + | |gene_alias=CRFG{{!}}NGB{{!}}NOG1 |
|gene_description=GTP binding protein 4 | |gene_description=GTP binding protein 4 | ||
|gene_id=23560 | |gene_id=23560 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_012341 | |nearest_refseq=NM_012341 | ||
|nearest_unigene=Hs.215766 | |nearest_unigene=Hs.215766 | ||
| − | |num_trans= | + | |num_trans=18 |
|species=human | |species=human | ||
|start=988707 | |start=988707 | ||
Revision as of 17:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 988713 |
|---|---|
| End of the center position in the TSS region: | 988714 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK301721 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | AK301721:0 ENST00000360059.5:-2 AK302219:-207 BC033784:-209 AF325353:-228 KJ898511:-231 ENST00000491635.1:-246 AK097093:-246 AK295231:-246 AK001548:-246 AK222861:-246 BC038975:-249 AF120334:-251 BC021243:-258 BC008683:-261 ENST00000360803.9:-274 NM_012341:-274 AK001552:-299 |
TATA-Box annotation
| Distance to TSS: | 280 |
|---|---|
| Nearest PromoterID: | NM_012341 |
| Entrez ID: | 23560 |
| Nearest Unigene: | Hs.215766 |
| Nearest Refseq: | NM_012341 |
| Nearest Ensembl: | ENSG00000107937 |
| Gene Name: | GTP binding protein 4 |
| Gene Alias: | CRFG|NGB|NOG1 |
| Gene Description: | GTP binding protein 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
