Difference between revisions of "TSS:Hg 103433.1"
From referenceTSS
| Line 2: | Line 2: | ||
|HT009= | |HT009= | ||
|IDI2-AS= | |IDI2-AS= | ||
| − | |all_trans= | + | |all_trans=ENST00000428780.3:0 ENST00000665330.1:0 ENST00000437374.6:0 ENST00000420381.5:0 NR_024628:0 NR_024629:0 NR_027708:0 NR_027709:0 AK314921:0 BC050694:0 AF220183:0 BC018729:0 ENST00000434470.1:2 BC104155:75 BC104156:75 BC112975:75 BC112976:75 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 11: | Line 11: | ||
|entrez_id=55853 | |entrez_id=55853 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=C10orf110 | + | |gene_alias=C10orf110{{!}}HT009{{!}}IDI2-AS |
|gene_description=IDI2 antisense RNA 1 | |gene_description=IDI2 antisense RNA 1 | ||
|gene_id=55853 | |gene_id=55853 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:30885 | |hgnc_mgi_id=HGNC:30885 | ||
|nearest_ensembl=ENSG00000232656 | |nearest_ensembl=ENSG00000232656 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_024629 |
|nearest_refseq=NM_018470 | |nearest_refseq=NM_018470 | ||
|nearest_unigene=Hs.728538 | |nearest_unigene=Hs.728538 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=1022627 | |start=1022627 | ||
|start_of_center_position=1022649 | |start_of_center_position=1022649 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000437374. | + | |transcript_name=ENST00000428780.3 ENST00000665330.1 ENST00000437374.6 ENST00000420381.5 NR_024628 NR_024629 NR_027708 NR_027709 AK314921 BC050694 AF220183 BC018729 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103433.1 | |tss_id=hg_103433.1 | ||
Revision as of 17:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1022649 |
|---|---|
| End of the center position in the TSS region: | 1022650 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000428780.3 ENST00000665330.1 ENST00000437374.6 ENST00000420381.5 NR_024628 NR_024629 NR_027708 NR_027709 AK314921 BC050694 AF220183 BC018729 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000428780.3:0 ENST00000665330.1:0 ENST00000437374.6:0 ENST00000420381.5:0 NR_024628:0 NR_024629:0 NR_027708:0 NR_027709:0 AK314921:0 BC050694:0 AF220183:0 BC018729:0 ENST00000434470.1:2 BC104155:75 BC104156:75 BC112975:75 BC112976:75 |
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NR_024629 |
| Entrez ID: | 55853 |
| Nearest Unigene: | Hs.728538 |
| Nearest Refseq: | NM_018470 |
| Nearest Ensembl: | ENSG00000232656 |
| Gene Name: | IDI2 antisense RNA 1 |
| Gene Alias: | C10orf110|HT009|IDI2-AS |
| Gene Description: | IDI2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
