Difference between revisions of "TSS:Hg 103438.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000650072.1:0 LF384896:0 MA620473:0 AK307259:0 AL136827:0 AK292591:8 LF330786:9 MA566363:9 MP014889:-335 ENST00000620998.4:-378 ENST00000381329.5:-378 BC018044:-378 ENST00000263150.9:-397 NM_014023:-397 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-119 |
|end=1056865 | |end=1056865 | ||
|end_of_center_position=1056824 | |end_of_center_position=1056824 | ||
| − | |entrez_id= | + | |entrez_id=3422 |
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias= | + | |gene_alias=IPP1{{!}}IPPI1 |
| − | |gene_description= | + | |gene_description=isopentenyl-diphosphate delta isomerase 1 |
|gene_id=22884 | |gene_id=22884 | ||
|gene_name=WD repeat domain 37 | |gene_name=WD repeat domain 37 | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:31406 | |hgnc_mgi_id=HGNC:31406 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000067064 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001317955 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_004508 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.283652 |
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=1056781 | |start=1056781 | ||
|start_of_center_position=1056823 | |start_of_center_position=1056823 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000650072.1 LF384896 MA620473 AK307259 AL136827 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103438.1 | |tss_id=hg_103438.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A3B3IT47 |
}} | }} | ||
Revision as of 17:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1056823 |
|---|---|
| End of the center position in the TSS region: | 1056824 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000650072.1 LF384896 MA620473 AK307259 AL136827 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000650072.1:0 LF384896:0 MA620473:0 AK307259:0 AL136827:0 AK292591:8 LF330786:9 MA566363:9 MP014889:-335 ENST00000620998.4:-378 ENST00000381329.5:-378 BC018044:-378 ENST00000263150.9:-397 NM_014023:-397 |
TATA-Box annotation
| Distance to TSS: | -119 |
|---|---|
| Nearest PromoterID: | NM_001317955 |
| Entrez ID: | 3422 |
| Nearest Unigene: | Hs.283652 |
| Nearest Refseq: | NM_004508 |
| Nearest Ensembl: | ENSG00000067064 |
| Gene Name: | WD repeat domain 37 |
| Gene Alias: | IPP1|IPPI1 |
| Gene Description: | isopentenyl-diphosphate delta isomerase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
