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Difference between revisions of "TSS:Hg 10344.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=NM_002521:0 ENST00000376468.3:3 uc001atj.4:3 M25296:3 BC025785:12 KJ891714:100 CR541976:101 CR542003:101
+
|all_trans=ENST00000376468.4:0 NM_002521:0 M25296:3 BC025785:12 KJ891714:100 CR541976:101 CR542003:101
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.045
 
|cpg_percent=0.045
 
|distance=0
 
|distance=0
|distance_to_tss=-10
+
|distance_to_tss=0
 
|end=11858956
 
|end=11858956
 
|end_of_center_position=11858945
 
|end_of_center_position=11858945
Line 22: Line 22:
 
|nearest_refseq=NM_002521
 
|nearest_refseq=NM_002521
 
|nearest_unigene=Hs.219140
 
|nearest_unigene=Hs.219140
|num_trans=8
+
|num_trans=7
 
|species=human
 
|species=human
 
|start=11858933
 
|start=11858933
 
|start_of_center_position=11858944
 
|start_of_center_position=11858944
 
|strand=-
 
|strand=-
|transcript_name=NM_002521
+
|transcript_name=ENST00000376468.4 NM_002521
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_10344.1
 
|tss_id=hg_10344.1

Revision as of 17:26, 15 June 2021

Basic information about the TSS


TSS ID:hg_10344.1
Species:human
Chr:chr1
TSS Classification:yes
Start:11858933
End:11858956
Strand:-
TSS Score:1
Start of the center position in the TSS region:11858944
End of the center position in the TSS region:11858945



Gene and protein annotation


Transcript_name:ENST00000376468.4 NM_002521
Distance:0
GeneID:4879
HGNC/MGI_ID:HGNC:7940
UniProt_ID:P16860
Gene_name:natriuretic peptide B
Gene_symbol:NPPB
Gene_synonyms:
Gene_source:HGNC:7940



Transcript annotation


Transcript_name:ENST00000376468.4 NM_002521
Distance:0
Num_trans:7
All_trans:ENST00000376468.4:0 NM_002521:0 M25296:3 BC025785:12 KJ891714:100 CR541976:101 CR542003:101



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NM_002521
Entrez ID:4879
Nearest Unigene:Hs.219140
Nearest Refseq:NM_002521
Nearest Ensembl:ENSG00000120937
Gene Name:natriuretic peptide B
Gene Alias:BNP
Gene Description:natriuretic peptide B
Gene Type:protein-coding
CpG%:0.045
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):