Difference between revisions of "TSS:Hg 103459.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000653889.1:292 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=292 |
|distance_to_tss=57054 | |distance_to_tss=57054 | ||
|end=1957297 | |end=1957297 | ||
| + | |end_of_center_position=1957295 | ||
|entrez_id=282980 | |entrez_id=282980 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| Line 15: | Line 17: | ||
|nearest_refseq=NR_040253 | |nearest_refseq=NR_040253 | ||
|nearest_unigene=Hs.576810 | |nearest_unigene=Hs.576810 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=1957291 | |start=1957291 | ||
| + | |start_of_center_position=1957294 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000653889.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103459.1 | |tss_id=hg_103459.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:27, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 1957294 |
|---|---|
| End of the center position in the TSS region: | 1957295 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000653889.1 |
|---|---|
| Distance: | 292 |
| Num_trans: | 1 |
| All_trans: | ENST00000653889.1:292 |
TATA-Box annotation
| Distance to TSS: | 57054 |
|---|---|
| Nearest PromoterID: | NR_040253 |
| Entrez ID: | 282980 |
| Nearest Unigene: | Hs.576810 |
| Nearest Refseq: | NR_040253 |
| Nearest Ensembl: | ENSG00000234962 |
| Gene Name: | LINC00700 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 700 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
