Difference between revisions of "TSS:Hg 103479.1"
From referenceTSS
| Line 3: | Line 3: | ||
|PFK-P= | |PFK-P= | ||
|PFKF= | |PFKF= | ||
| − | |all_trans=ENST00000607886.5 | + | |all_trans=ENST00000607886.5:-230 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=-230 | |distance=-230 | ||
| − | |distance_to_tss= | + | |distance_to_tss=362 |
|end=3066580 | |end=3066580 | ||
|end_of_center_position=3066572 | |end_of_center_position=3066572 | ||
| − | |entrez_id= | + | |entrez_id=101927824 |
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=uncharacterized LOC101927824 |
|gene_id=5214 | |gene_id=5214 | ||
| − | |gene_name= | + | |gene_name=phosphofructokinase, platelet |
|gene_source=HGNC:8878 | |gene_source=HGNC:8878 | ||
|gene_symbol=PFKP | |gene_symbol=PFKP | ||
|gene_synonyms=PFK-C PFKF | |gene_synonyms=PFK-C PFKF | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|hgnc_mgi_id=HGNC:8878 | |hgnc_mgi_id=HGNC:8878 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_160682 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_160681 |
| − | |nearest_unigene= | + | |nearest_unigene= |
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=3066562 | |start=3066562 | ||
|start_of_center_position=3066571 | |start_of_center_position=3066571 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000607886.5 | + | |transcript_name=ENST00000607886.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103479.1 | |tss_id=hg_103479.1 | ||
Revision as of 17:27, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3066571 |
|---|---|
| End of the center position in the TSS region: | 3066572 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000607886.5 |
|---|---|
| Distance: | -230 |
| Num_trans: | 1 |
| All_trans: | ENST00000607886.5:-230 |
TATA-Box annotation
| Distance to TSS: | 362 |
|---|---|
| Nearest PromoterID: | NR_160682 |
| Entrez ID: | 101927824 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_160681 |
| Nearest Ensembl: | |
| Gene Name: | phosphofructokinase, platelet |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101927824 |
| Gene Type: | ncRNA |
| CpG%: | 0.095 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
