Difference between revisions of "TSS:Hg 10348.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=1324 |entrez_id=26829 |gc_percent=0.587065 |gene_alias=RNU5E|U5E |gene_description="RNA, U5E small nuclear 1" |gene_name=RNU5E-1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |U5E= | ||
| + | |all_trans=uc057cii.1:-447 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| + | |distance=NA | ||
|distance_to_tss=1324 | |distance_to_tss=1324 | ||
| + | |end=11909480 | ||
| + | |end_of_center_position=11909479 | ||
|entrez_id=26829 | |entrez_id=26829 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=RNU5E | + | |gene_alias=RNU5E{{!}}U5E |
| − | |gene_description= | + | |gene_description=RNA, U5E small nuclear 1 |
|gene_name=RNU5E-1 | |gene_name=RNU5E-1 | ||
|gene_type=snRNA | |gene_type=snRNA | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NR_002754 | |nearest_refseq=NR_002754 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=11909476 | ||
| + | |start_of_center_position=11909478 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10348.1 | |tss_id=hg_10348.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:27, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11909478 |
|---|---|
| End of the center position in the TSS region: | 11909479 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | uc057cii.1:-447 |
TATA-Box annotation
| Distance to TSS: | 1324 |
|---|---|
| Nearest PromoterID: | NR_002754 |
| Entrez ID: | 26829 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_002754 |
| Nearest Ensembl: | ENSG00000199347 |
| Gene Name: | RNU5E-1 |
| Gene Alias: | RNU5E|U5E |
| Gene Description: | RNA, U5E small nuclear 1 |
| Gene Type: | snRNA |
| CpG%: | 0.08 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
