Difference between revisions of "TSS:Hg 103480.1"
From referenceTSS
| Line 3: | Line 3: | ||
|PFK-P= | |PFK-P= | ||
|PFKF= | |PFKF= | ||
| − | |all_trans=ENST00000381125. | + | |all_trans=BC029138:19 ENST00000381125.9:47 NM_002627:47 NM_001323069:47 NM_001323068:47 NM_001323071:47 AK291841:47 BC002536:59 D25328:62 AB385041:90 DQ895147:93 EU176319:93 CU678026:95 KJ897323:95 KJ905260:95 KJ905857:95 ENST00000495715.1:171 NM_001323067:469 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=19 | |distance=19 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-49 |
|end=3067501 | |end=3067501 | ||
|end_of_center_position=3067500 | |end_of_center_position=3067500 | ||
|entrez_id=5214 | |entrez_id=5214 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| − | |gene_alias=ATP-PFK | + | |gene_alias=ATP-PFK{{!}}PFK-C{{!}}PFK-P{{!}}PFKF |
| − | |gene_description= | + | |gene_description=phosphofructokinase, platelet |
|gene_id=5214 | |gene_id=5214 | ||
| − | |gene_name= | + | |gene_name=phosphofructokinase, platelet |
|gene_source=HGNC:8878 | |gene_source=HGNC:8878 | ||
|gene_symbol=PFKP | |gene_symbol=PFKP | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:8878 | |hgnc_mgi_id=HGNC:8878 | ||
|nearest_ensembl=ENSG00000067057 | |nearest_ensembl=ENSG00000067057 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001323071 |
|nearest_refseq=NM_002627 | |nearest_refseq=NM_002627 | ||
|nearest_unigene=Hs.26010 | |nearest_unigene=Hs.26010 | ||
| − | |num_trans= | + | |num_trans=18 |
|species=human | |species=human | ||
|start=3067497 | |start=3067497 | ||
|start_of_center_position=3067499 | |start_of_center_position=3067499 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC029138 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103480.1 | |tss_id=hg_103480.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:27, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3067499 |
|---|---|
| End of the center position in the TSS region: | 3067500 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC029138 |
|---|---|
| Distance: | 19 |
| Num_trans: | 18 |
| All_trans: | BC029138:19 ENST00000381125.9:47 NM_002627:47 NM_001323069:47 NM_001323068:47 NM_001323071:47 AK291841:47 BC002536:59 D25328:62 AB385041:90 DQ895147:93 EU176319:93 CU678026:95 KJ897323:95 KJ905260:95 KJ905857:95 ENST00000495715.1:171 NM_001323067:469 |
TATA-Box annotation
| Distance to TSS: | -49 |
|---|---|
| Nearest PromoterID: | NM_001323071 |
| Entrez ID: | 5214 |
| Nearest Unigene: | Hs.26010 |
| Nearest Refseq: | NM_002627 |
| Nearest Ensembl: | ENSG00000067057 |
| Gene Name: | phosphofructokinase, platelet |
| Gene Alias: | ATP-PFK|PFK-C|PFK-P|PFKF |
| Gene Description: | phosphofructokinase, platelet |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
