Difference between revisions of "TSS:Hg 103507.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=1838 |entrez_id=1316 |gc_percent=0.552239 |gene_alias=BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 |gene_description=Kruppel like fact...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CBA1= | ||
| + | |COPEB= | ||
| + | |CPBP= | ||
| + | |GBF= | ||
| + | |PAC1= | ||
| + | |ST12= | ||
| + | |ZF9= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=1766 | ||
| + | |end=3783452 | ||
| + | |end_of_center_position=3783444 | ||
|entrez_id=1316 | |entrez_id=1316 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=BCD1 | + | |gene_alias=BCD1{{!}}CBA1{{!}}COPEB{{!}}CPBP{{!}}GBF{{!}}PAC1{{!}}ST12{{!}}ZF9 |
|gene_description=Kruppel like factor 6 | |gene_description=Kruppel like factor 6 | ||
|gene_name=KLF6 | |gene_name=KLF6 | ||
| Line 12: | Line 23: | ||
|nearest_refseq=NM_001300 | |nearest_refseq=NM_001300 | ||
|nearest_unigene=Hs.4055 | |nearest_unigene=Hs.4055 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=3783434 | ||
| + | |start_of_center_position=3783443 | ||
| + | |strand=+ | ||
| + | |tata_box=-81(GTCCATATAAGG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103507.1 | |tss_id=hg_103507.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:28, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 3783443 |
|---|---|
| End of the center position in the TSS region: | 3783444 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1766 |
|---|---|
| Nearest PromoterID: | NM_001300 |
| Entrez ID: | 1316 |
| Nearest Unigene: | Hs.4055 |
| Nearest Refseq: | NM_001300 |
| Nearest Ensembl: | ENSG00000067082 |
| Gene Name: | KLF6 |
| Gene Alias: | BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9 |
| Gene Description: | Kruppel like factor 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -81(GTCCATATAAGG,-,0.00) |
