Difference between revisions of "TSS:Hg 103601.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AKRDC1= | |AKRDC1= | ||
|LoopADR= | |LoopADR= | ||
| − | |all_trans=ENST00000474119.5:0 NR_073125:0 | + | |all_trans=ENST00000474119.5:0 NR_073125:0 NR_073126:0 NR_073127:0 NM_001271025:0 NM_001271021:0 AK074211:0 ENST00000298375.12:10 NM_001040177:10 ENST00000463345.5:37 BC002862:37 BC023972:-40 ENST00000525281.5:58 AK302155:58 ENST00000525627.1:89 ENST00000532248.5:99 ENST00000345253.9:99 ENST00000334019.4:99 AB040820:99 AB040821:99 AB040822:99 AF263242:108 CU678252:125 HQ447817:125 KJ903349:125 AB055603:128 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| Line 11: | Line 11: | ||
|entrez_id=83592 | |entrez_id=83592 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=AKR1CL2 | + | |gene_alias=AKR1CL2{{!}}AKRDC1{{!}}LoopADR{{!}}TAKR{{!}}hTSP{{!}}htAKR |
|gene_description=aldo-keto reductase family 1 member E2 | |gene_description=aldo-keto reductase family 1 member E2 | ||
|gene_id=83592 | |gene_id=83592 | ||
| − | |gene_name= | + | |gene_name=aldo-keto reductase family 1 member E2 |
|gene_source=HGNC:23437 | |gene_source=HGNC:23437 | ||
|gene_symbol=AKR1E2 | |gene_symbol=AKR1E2 | ||
| − | |gene_synonyms=MGC10612 | + | |gene_synonyms=HTSP1 MGC10612 htAKR |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hTSP= | |hTSP= | ||
| Line 23: | Line 23: | ||
|htAKR= | |htAKR= | ||
|nearest_ensembl=ENSG00000165568 | |nearest_ensembl=ENSG00000165568 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_073126 |
|nearest_refseq=NM_031436 | |nearest_refseq=NM_031436 | ||
|nearest_unigene=Hs.657944 | |nearest_unigene=Hs.657944 | ||
| − | |num_trans= | + | |num_trans=26 |
|species=human | |species=human | ||
|start=4826170 | |start=4826170 | ||
|start_of_center_position=4826183 | |start_of_center_position=4826183 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000474119.5 NR_073125 NM_001271025 NM_001271021 | + | |transcript_name=ENST00000474119.5 NR_073125 NR_073126 NR_073127 NM_001271025 NM_001271021 AK074211 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103601.1 | |tss_id=hg_103601.1 | ||
Revision as of 17:30, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 4826183 |
|---|---|
| End of the center position in the TSS region: | 4826184 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000474119.5 NR_073125 NR_073126 NR_073127 NM_001271025 NM_001271021 AK074211 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26 |
| All_trans: | ENST00000474119.5:0 NR_073125:0 NR_073126:0 NR_073127:0 NM_001271025:0 NM_001271021:0 AK074211:0 ENST00000298375.12:10 NM_001040177:10 ENST00000463345.5:37 BC002862:37 BC023972:-40 ENST00000525281.5:58 AK302155:58 ENST00000525627.1:89 ENST00000532248.5:99 ENST00000345253.9:99 ENST00000334019.4:99 AB040820:99 AB040821:99 AB040822:99 AF263242:108 CU678252:125 HQ447817:125 KJ903349:125 AB055603:128 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NR_073126 |
| Entrez ID: | 83592 |
| Nearest Unigene: | Hs.657944 |
| Nearest Refseq: | NM_031436 |
| Nearest Ensembl: | ENSG00000165568 |
| Gene Name: | aldo-keto reductase family 1 member E2 |
| Gene Alias: | AKR1CL2|AKRDC1|LoopADR|TAKR|hTSP|htAKR |
| Gene Description: | aldo-keto reductase family 1 member E2 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
