Difference between revisions of "TSS:Hg 103604.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AKRDC1= | |AKRDC1= | ||
|LoopADR= | |LoopADR= | ||
| − | |all_trans=ENST00000525627 | + | |all_trans=ENST00000525627.1:1 ENST00000532248.5:11 ENST00000345253.9:11 ENST00000334019.4:11 AB040820:11 AB040821:11 AB040822:11 ENST00000525281.5:-14 AK302155:-14 AF263242:20 ENST00000463345.5:-35 BC002862:-35 CU678252:37 HQ447817:37 KJ903349:37 AB055603:40 ENST00000298375.12:-62 NM_001040177:-62 ENST00000474119.5:-92 NR_073125:-92 NR_073126:-92 NR_073127:-92 NM_001271025:-92 NM_001271021:-92 AK074211:-92 BC023972:-138 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=1 | |distance=1 | ||
| − | |distance_to_tss= | + | |distance_to_tss=70 |
|end=4826285 | |end=4826285 | ||
|end_of_center_position=4826277 | |end_of_center_position=4826277 | ||
|entrez_id=83592 | |entrez_id=83592 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=AKR1CL2 | + | |gene_alias=AKR1CL2{{!}}AKRDC1{{!}}LoopADR{{!}}TAKR{{!}}hTSP{{!}}htAKR |
|gene_description=aldo-keto reductase family 1 member E2 | |gene_description=aldo-keto reductase family 1 member E2 | ||
|gene_id=83592 | |gene_id=83592 | ||
| − | |gene_name= | + | |gene_name=aldo-keto reductase family 1 member E2 |
|gene_source=HGNC:23437 | |gene_source=HGNC:23437 | ||
|gene_symbol=AKR1E2 | |gene_symbol=AKR1E2 | ||
| − | |gene_synonyms=MGC10612 | + | |gene_synonyms=HTSP1 MGC10612 htAKR |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hTSP= | |hTSP= | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_031436 | |nearest_refseq=NM_031436 | ||
|nearest_unigene=Hs.657944 | |nearest_unigene=Hs.657944 | ||
| − | |num_trans= | + | |num_trans=26 |
|species=human | |species=human | ||
|start=4826268 | |start=4826268 | ||
|start_of_center_position=4826276 | |start_of_center_position=4826276 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000525627 | + | |transcript_name=ENST00000525627.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103604.1 | |tss_id=hg_103604.1 | ||
Revision as of 17:30, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 4826276 |
|---|---|
| End of the center position in the TSS region: | 4826277 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000525627.1 |
|---|---|
| Distance: | 1 |
| Num_trans: | 26 |
| All_trans: | ENST00000525627.1:1 ENST00000532248.5:11 ENST00000345253.9:11 ENST00000334019.4:11 AB040820:11 AB040821:11 AB040822:11 ENST00000525281.5:-14 AK302155:-14 AF263242:20 ENST00000463345.5:-35 BC002862:-35 CU678252:37 HQ447817:37 KJ903349:37 AB055603:40 ENST00000298375.12:-62 NM_001040177:-62 ENST00000474119.5:-92 NR_073125:-92 NR_073126:-92 NR_073127:-92 NM_001271025:-92 NM_001271021:-92 AK074211:-92 BC023972:-138 |
TATA-Box annotation
| Distance to TSS: | 70 |
|---|---|
| Nearest PromoterID: | NM_001040177 |
| Entrez ID: | 83592 |
| Nearest Unigene: | Hs.657944 |
| Nearest Refseq: | NM_031436 |
| Nearest Ensembl: | ENSG00000165568 |
| Gene Name: | aldo-keto reductase family 1 member E2 |
| Gene Alias: | AKR1CL2|AKRDC1|LoopADR|TAKR|hTSP|htAKR |
| Gene Description: | aldo-keto reductase family 1 member E2 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
