Difference between revisions of "TSS:Hg 103606.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=42455 |entrez_id=83592 |gc_percent=0.353234 |gene_alias=AKR1CL2|AKRDC1|LoopADR|hTSP|htAKR |gene_description=aldo-keto reductase fam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AKRDC1= | ||
| + | |LoopADR= | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=42425 | ||
| + | |end=4868640 | ||
| + | |end_of_center_position=4868633 | ||
|entrez_id=83592 | |entrez_id=83592 | ||
|gc_percent=0.353234 | |gc_percent=0.353234 | ||
| − | |gene_alias=AKR1CL2 | + | |gene_alias=AKR1CL2{{!}}AKRDC1{{!}}LoopADR{{!}}TAKR{{!}}hTSP{{!}}htAKR |
|gene_description=aldo-keto reductase family 1 member E2 | |gene_description=aldo-keto reductase family 1 member E2 | ||
|gene_name=AKR1E2 | |gene_name=AKR1E2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hTSP= | ||
| + | |htAKR= | ||
|nearest_ensembl=ENSG00000165568 | |nearest_ensembl=ENSG00000165568 | ||
|nearest_promoter_id=NM_001040177 | |nearest_promoter_id=NM_001040177 | ||
|nearest_refseq=NM_031436 | |nearest_refseq=NM_031436 | ||
|nearest_unigene=Hs.657944 | |nearest_unigene=Hs.657944 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=4868624 | ||
| + | |start_of_center_position=4868632 | ||
| + | |strand=+ | ||
| + | |tata_box=-39(GTGTTTAAAAAG,-,0.00),-37(GTTTAAAAAGAG,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103606.1 | |tss_id=hg_103606.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:30, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 4868632 |
|---|---|
| End of the center position in the TSS region: | 4868633 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 42425 |
|---|---|
| Nearest PromoterID: | NM_001040177 |
| Entrez ID: | 83592 |
| Nearest Unigene: | Hs.657944 |
| Nearest Refseq: | NM_031436 |
| Nearest Ensembl: | ENSG00000165568 |
| Gene Name: | AKR1E2 |
| Gene Alias: | AKR1CL2|AKRDC1|LoopADR|TAKR|hTSP|htAKR |
| Gene Description: | aldo-keto reductase family 1 member E2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.353234 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -39(GTGTTTAAAAAG,-,0.00),-37(GTTTAAAAAGAG,+,0.00) |
